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Updated: May 17, 2026

From a Natural Product to Its Biosynthetic Gene Cluster: A Demonstration Using Polyketomycin from Streptomyces diastatochromogenes Tü6028
Published on: January 13, 2017
Quartromicin biosynthesis: two alternative polyketide chains produced by one polyketide synthase assembly line.
Hai-Yan He1, Hai-Xue Pan, Long-Fei Wu
1State Key Laboratory of Bio-organic and Natural Products Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China.
Researchers identified the biosynthetic gene cluster for quartromicins, unique antiviral spirotetronate natural products. This study reveals how 1,3-bisphosphoglycerate is incorporated into the tetronate ring and suggests a module skipping strategy in polyketide synthesis.
Area of Science:
- Natural Product Biosynthesis
- Molecular Biology
- Biochemistry
Background:
- Quartromicins are unique antiviral compounds belonging to the spirotetronate natural product family.
- Understanding their biosynthesis is crucial for developing novel antiviral agents.
Purpose of the Study:
- To identify the biosynthetic gene cluster responsible for quartromicin production.
- To elucidate the mechanism of tetronate ring formation and polyketide chain generation.
Main Methods:
- Degenerate primer PCR amplification was used to identify key genes in the biosynthetic pathway.
- In vitro reconstruction experiments were performed to confirm biochemical steps.
- Analysis of polyketide synthase (PKS) assembly line strategies.
Main Results:
- The biosynthetic gene cluster for quartromicins was successfully identified.
- Biochemical assays confirmed the incorporation of 1,3-bisphosphoglycerate into the tetronate ring.
- Evidence for a module skipping strategy in polyketide synthesis was observed, leading to alternative product formation.
Conclusions:
- The study provides a foundational understanding of quartromicin biosynthesis.
- The findings shed light on the stereodivergent intermolecular cyclization and C2 symmetric molecule construction.
- This work opens avenues for future research into natural product drug discovery and synthetic biology.
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