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Updated: May 17, 2026

Sub-nanometer Resolution Imaging with Amplitude-modulation Atomic Force Microscopy in Liquid
Published on: December 20, 2016
Water-mediated height artifacts in dynamic atomic force microscopy
A Verdaguer1, S Santos, G Sauthier
1Centre d' Investigació en Nanociència i Nanotecnologia, Campus UAB, Esfera UAB, Bellaterra, Catalunya, Spain. averdaguer@cin2.cat
Amplitude modulation atomic force microscopy (AM-AFM) can inaccurately measure surface heights due to water layers. Even without water menisci, heterogeneous surface affinities lead to incorrect height measurements, necessitating a review of published data.
Area of Science:
- Surface science
- Nanotechnology
- Materials characterization
Background:
- Amplitude modulation atomic force microscopy (AM-AFM) is widely used for nanoscale surface characterization under ambient conditions.
- Water films on surfaces and tips, common in ambient AM-AFM, cause apparent height variations due to capillary forces and water menisci.
- Differential surface affinities (hydrophilic/hydrophobic) exacerbate height measurement errors.
Purpose of the Study:
- To systematically investigate the impact of water layers and heterogeneous surface affinities on height measurements in AM-AFM.
- To explore the phenomenon of apparent height variations and contrast inversion under different operating conditions.
- To provide a theoretical and experimental basis for re-evaluating critical height measurements in published AM-AFM studies.
Main Methods:
- Experimental study using self-assembled monolayers of stearic acid (hydrophobic) on mica (hydrophilic).
- Theoretical simulation using a simplified point mass on a spring model to mimic AFM tip dynamics.
- Systematic variation of AM-AFM operation parameters (free oscillation amplitude, setpoint).
Main Results:
- Apparent heights measured by AM-AFM can vary significantly in magnitude and even sign (contrast inversion) depending on operation parameters.
- True surface heights cannot be accurately determined in the presence of water layers on surfaces with non-uniform water affinity, even if water menisci are not formed.
- The study demonstrates a critical limitation of AM-AFM for accurate height determination in ambient conditions with heterogeneous surfaces.
Conclusions:
- Published AM-AFM studies relying on accurate height measurements, especially on heterogeneous surfaces under ambient conditions, should be critically reviewed.
- The influence of water layers and surface properties on tip-sample interactions needs careful consideration for reliable nanoscale characterization.
- Further research into advanced AFM techniques or controlled environments may be necessary to overcome these height measurement limitations.
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