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Updated: May 17, 2026

An Integrated Platform for Genome-wide Mapping of Chromatin States Using High-throughput ChIP-sequencing in Tumor Tissues
Published on: April 5, 2018
Deregulated chromatin remodeling in the pathobiology of brain tumors
Anastasia Spyropoulou1, Christina Piperi, Christos Adamopoulos
1Department of Biological Chemistry, Medical School, University of Athens, 75, M. Asias Street, 11527, Athens, Greece.
Abstract:
Brain tumors encompass a heterogeneous group of malignant tumors with variable histopathology, aggressiveness, clinical outcome and prognosis. Current gene expression profiling studies indicate interplay of genetic and epigenetic alterations in their pathobiology. A central molecular event underlying epigenetics is the alteration of chromatin structure by post-translational modifications of DNA and histones as well as nucleosome repositioning. Dynamic remodeling of the fundamental nucleosomal structure of chromatin or covalent histone marks located in core histones regulate main cellular processes including DNA methylation, replication, DNA-damage repair as well as gene expression. Deregulation of these processes has been linked to tumor suppressor gene silencing, cancer initiation and progression. The reversible nature of deregulated chromatin structure by DNA methylation and histone deacetylation inhibitors, leading to re-expression of tumor suppressor genes, makes chromatin-remodeling pathways as promising therapeutic targets. In fact, a considerable number of these inhibitors are being tested today either alone or in combination with other agents or conventional treatments in the management of brain tumors with considerable success. In this review, we focus on the mechanisms underpinning deregulated chromatin remodeling in brain tumors, discuss their potential clinical implications and highlight the advances toward new therapeutic strategies.
Insights
Brain tumors involve epigenetic changes affecting chromatin structure. Inhibitors targeting these chromatin remodeling pathways show promise for treating brain tumors by re-expressing tumor suppressor genes.
Area of Science:
- Oncology
- Epigenetics
- Molecular Biology
Background:
- Brain tumors are diverse malignant neoplasms with complex genetic and epigenetic alterations.
- Chromatin structure, regulated by DNA and histone modifications, is crucial for cellular processes.
- Deregulation of chromatin remodeling contributes to tumor suppressor gene silencing, cancer initiation, and progression.
Purpose of the Study:
- To review the mechanisms of deregulated chromatin remodeling in brain tumors.
- To discuss the clinical implications of these epigenetic alterations.
- To highlight therapeutic strategies targeting chromatin remodeling in brain tumors.
Main Methods:
- Review of current literature on gene expression profiling in brain tumors.
- Analysis of epigenetic mechanisms, including DNA methylation and histone modifications.
- Examination of therapeutic approaches involving chromatin-modifying agents.
Main Results:
- Epigenetic alterations, particularly in chromatin structure, are central to brain tumor pathobiology.
- Dysregulated chromatin remodeling silences tumor suppressor genes, driving cancer development.
- DNA methylation and histone deacetylation inhibitors can reverse these changes, re-expressing tumor suppressor genes.
Conclusions:
- Chromatin remodeling pathways are promising therapeutic targets for brain tumors.
- Inhibitors of DNA methylation and histone deacetylation are being investigated with success.
- Targeting epigenetic mechanisms offers a novel strategy for brain tumor management.
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