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Updated: May 17, 2026

X-Ray Crystallography to Study the Oligomeric State Transition of the Thermotoga maritima M42 Aminopeptidase TmPep1050
Published on: May 13, 2020
Downstream processing, characterization, and structure-function relationship of solvent-, detergent-, psychro-,
Santosh Kumar Singh1, Sanjay Kumar Singh, Vinayak Ram Tripathi
1Center of Excellence, Dept. of Microbiology, Dr. Ram Manohar Lohia Avadh University, Faizabad, Uttar Pradesh 224001, India.
Abstract:
The purification and characterization of psychro-thermoalkalistable protease from psychrotrophic Pseudomonas putida isolate is being reported for the first time. A ~53 kDa protease was purified 21.4-folds with 57.2% recovery by ultrafiltration and hydrophobic interaction chromatography. Kinetic analyses revealed the K(m) and V(max) to be 1.169 mg mL(-1) and 0.833 mg mL(-1) min(-1) , respectively. The k(cat) value of 3.05 × 10(2) s(-1) indicated high affinity and catalytic efficiency toward casein. The protease was most active at pH 9.5 and 40°C, with 100% stability in pH and temperature range of 6.0-11.0 and 10-40°C, respectively. Presence of Zn(2+) increased the thermostability of protease (at 70°C) by 433%. Ethylene diamine tetra acetic acid (EDTA) and 1,10-phenanthroline were inhibitory, whereas phenyl methyl sulfonyl fluoride (PMSF), p-chloro mercuric benzoate (PCMB), and β-mercaptoethanol were ineffective, revealing the enzyme to be a metalloprotease. Zinc, calcium, iron, nickel, and copper at 1 mM increased the enzyme activity (102-134%). Complete reversion of enzyme inhibition (caused by Ethylene diamine tetra acetic acid [EDTA]) by Zn(2+) affirmed this enzyme as zinc-dependent metalloprotease. At 0.1% concentration, Triton X-100 and Tween 80 slightly increased, while SDS and H(2) O(2) reduced the protease activity. In the presence of 0.1% commercial detergents, the enzyme was fairly stable (54-81%). In the presence of organic solvent, the protease was remarkably stable exhibiting 72-191% activities. In contrast, savinase exhibited good stability in the presence of hydrophilic solvents, while chymotrypsin showed elevated activities with benzene, toluene, and xylene only. Circular dichroism analysis revealed the protease as a β-rich protein, having large fraction (∼40%) of β-sheets. Presence of different environmental conditions altered the β-content, which accordingly affected the protease activity.
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