Related Experiment Video
Updated: May 16, 2026

Microcrystallography of Protein Crystals and In Cellulo Diffraction
Published on: July 21, 2017
Nearest-cell: a fast and easy tool for locating crystal matches in the PDB
V Ramraj1, G Evans, J M Diprose
1The Division of Structural Biology, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, England. varun@strubi.ox.ac.uk
Abstract:
When embarking upon X-ray diffraction data collection from a potentially novel macromolecular crystal form, it can be useful to ascertain whether the measured data reflect a crystal form that is already recorded in the Protein Data Bank and, if so, whether it is part of a large family of related structures. Providing such information to crystallographers conveniently and quickly, as soon as the first images have been recorded and the unit cell characterized at an X-ray beamline, has the potential to save time and effort as well as pointing to possible search models for molecular replacement. Given an input unit cell, and optionally a space group, Nearest-cell rapidly scans the Protein Data Bank and retrieves near-matches.
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