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Updated: May 16, 2026

Soil Lysimeter Excavation for Coupled Hydrological, Geochemical, and Microbiological Investigations
Published on: September 11, 2016
A hydration-based biophysical index for the onset of soil microbial coexistence
1Institute of Terrestrial Ecosystems, ETH Zurich, Universitaetstrasse 16, 8092 Zurich, Switzerland.
Abstract:
Mechanistic exploration of the origins of the unparalleled soil microbial biodiversity represents a vast and uncharted scientific frontier. Quantification of candidate mechanisms that promote and sustain such diversity must be linked with microbial functions and measurable biophysical interactions at appropriate scales. We report a novel microbial coexistence index (CI) that links macroscopic soil hydration conditions with microscale aquatic habitat fragmentation that impose restrictions on cell dispersion and growth rates of competing microbial populations cohabiting soil surfaces. The index predicts a surprisingly narrow range of soil hydration conditions that suppress microbial coexistence; and for most natural conditions found in soil hydration supports coexistence. The critical hydration conditions and relative abundances of competing species are consistent with limited experimental observations and with individual-based model simulations. The proposed metric offers a means for systematic evaluation of factors that regulate microbial coexistence in an ecologically consistent fashion.
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