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Estimating time-correlation functions by sampling and unbiasing dynamically activated events.

Manuel Athènes1, Mihai-Cosmin Marinica, Thomas Jourdan

  • 1CEA, DEN, Service de Recherches de Métallurgie Physique, F-91191 Gif-sur-Yvette, France.

The Journal of Chemical Physics
|November 28, 2012
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Summary
This summary is machine-generated.

This study introduces a new method for transition path sampling, enhancing rare-event simulations by biasing trajectories using Jacobian eigenvalues. This approach accelerates the discovery of critical reactive pathways in complex systems.

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Area of Science:

  • Computational Physics
  • Materials Science
  • Statistical Mechanics

Background:

  • Transition path sampling (TPS) is crucial for rare-event simulations in many-body systems.
  • Estimating state-to-state time-correlation functions requires sampling short trajectories.
  • Existing methods can be computationally intensive for rare events.

Purpose of the Study:

  • To develop an improved biasing strategy for transition path sampling.
  • To enhance the efficiency of sampling rare reactive trajectories.
  • To accurately estimate time-correlation functions and reaction rates.

Main Methods:

  • Biasing the importance function using the lowest Jacobian eigenvalue moduli along dynamical trajectories.
  • Utilizing the Lanczos algorithm to evaluate the lowest eigenvalue modulus.
  • Employing the multi-state Bennett acceptance ratio (MBAR) method for trajectory unbiasing.
  • Recycling information from rejected trajectories for computational speed-up.

Main Results:

  • The proposed method effectively favors sampling of activated and rare reactive trajectories.
  • Accurate estimation of time-correlation functions for vacancy migration in α-iron.
  • Calculated migration rates agree with transition state theory predictions.
  • Significant speed-up achieved by recycling rejected trajectory data.

Conclusions:

  • The novel biasing strategy enhances the efficiency of transition path sampling for rare-event simulations.
  • This method provides accurate estimates of dynamic properties like migration rates.
  • The approach offers a computationally advantageous alternative to traditional TPS by avoiding reversible work calculations.