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Updated: May 16, 2026

Evaluation of LC3-II Release via Extracellular Vesicles in Relation to the Accumulation of Intracellular LC3-positive Vesicles
Published on: October 18, 2024
An autophagy-independent role for LC3 in equine arteritis virus replication
Iryna Monastyrska1, Mustafa Ulasli, Peter J M Rottier
1Virology Division, Department of Infectious Diseases & Immunology, Utrecht University, Utrecht, The Netherlands.
Abstract:
Equine arteritis virus (EAV) is an enveloped, positive-strand RNA virus. Genome replication of EAV has been associated with modified intracellular membranes that are shaped into double-membrane vesicles (DMVs). We showed by immuno-electron microscopy that the DMVs induced in EAV-infected cells contain double-strand (ds)RNA molecules, presumed RNA replication intermediates, and are decorated with the autophagy marker protein microtubule-associated protein 1 light chain 3 (LC3). Replication of EAV, however, was not affected in autophagy-deficient cells lacking autophagy-related protein 7 (ATG7). Nevertheless, colocalization of DMVs and LC3 was still observed in these knockout cells, which only contain the nonlipidated form of LC3. Although autophagy is not required, depletion of LC3 markedly reduced the replication of EAV. EAV replication could be fully restored in these cells by expression of a nonlipidated form of LC3. These findings demonstrate an autophagy-independent role for LC3 in EAV replication. Together with the observation that EAV-induced DMVs are also positive for ER degradation-enhancing α-mannosidase-like 1 (EDEM1), our data suggested that this virus, similarly to the distantly-related mouse hepatitis coronavirus, hijacks the ER-derived membranes of EDEMosomes to ensure its efficient replication.
Insights
Equine arteritis virus (EAV) uses modified cell membranes for replication. Researchers found microtubule-associated protein 1 light chain 3 (LC3) is crucial for EAV replication, independent of autophagy.
Area of Science:
- Virology
- Molecular Biology
- Cell Biology
Background:
- Equine arteritis virus (EAV), an enveloped positive-strand RNA virus, replicates within modified intracellular membranes forming double-membrane vesicles (DMVs).
- The precise mechanisms and host factors involved in EAV-induced membrane modification and viral replication are not fully understood.
Purpose of the Study:
- To investigate the role of autophagy-related proteins, specifically microtubule-associated protein 1 light chain 3 (LC3), in the replication of Equine arteritis virus (EAV).
- To elucidate the function of EAV-induced double-membrane vesicles (DMVs) and their association with host cell machinery.
Main Methods:
- Immuno-electron microscopy was used to visualize DMVs and associated proteins in EAV-infected cells.
- Experiments were conducted in wild-type and autophagy-deficient cells (lacking ATG7) to assess the impact of autophagy on EAV replication.
- LC3 depletion and re-expression studies were performed to determine its specific role in viral replication.
Main Results:
- EAV-induced DMVs were found to contain double-stranded RNA and were decorated with LC3, even in autophagy-deficient cells.
- Autophagy-related protein 7 (ATG7) deficiency did not impair EAV replication, suggesting autophagy is not essential.
- Depletion of LC3 significantly reduced EAV replication, which could be rescued by expressing a nonlipidated form of LC3, indicating an autophagy-independent function.
Conclusions:
- Microtubule-associated protein 1 light chain 3 (LC3) plays a critical, autophagy-independent role in Equine arteritis virus (EAV) replication.
- EAV appears to hijack ER-derived membranes, specifically EDEMosomes (positive for EDEM1), for efficient replication, similar to other viruses.
- These findings reveal a novel mechanism of viral replication involving host membrane manipulation and specific protein interactions.
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