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Updated: May 16, 2026

Assaying Protein Kinase Activity with Radiolabeled ATP
Published on: May 26, 2017
Structure of extracellular signal-regulated kinase 2 in complex with ATP and ADP
Jun Zhang1, Paul Shapiro, Edwin Pozharski
1Department of Pharmaceutical Sciences, University of Maryland School of Pharmacy, 20 Penn Street, Baltimore, MD 21201, USA.
Abstract:
Extracellular signal-regulated kinases 1 and 2 (ERK1 and ERK2) are members of the mitogen-activated protein (MAP) kinase family. Constitutive activation of the ERK proteins contributes to the development and progression of numerous human tumors. Thus, ERK1 and ERK2 are promising targets for the design and the development of anticancer drugs. The detailed structural analysis of ERK complexed with ATP can provide valuable information for the design of new ligands that can bind in the ATP-binding pocket and inhibit ERK activity. In this study, the structures of apo-form ERK2 and of its complexes with the substrate ATP and the product ADP were determined. Comparison with the structural homolog cyclin-dependent kinase 2 reveals differences in the way that the ATP binding to the protein is mediated by magnesium. Only minor conformational changes are identified that occur upon substrate binding, and these are limited to the active-site residues.
Insights
Extracellular signal-regulated kinases (ERK1 and ERK2) are key in cancer. Understanding their ATP-binding pocket structures, determined in this study, aids in designing new anticancer drugs to inhibit ERK activity.
Area of Science:
- Biochemistry
- Molecular Biology
- Structural Biology
Background:
- Extracellular signal-regulated kinases 1 and 2 (ERK1 and ERK2) are mitogen-activated protein (MAP) kinases.
- Constitutive activation of ERK proteins is implicated in human tumor development and progression.
- ERK1 and ERK2 represent promising therapeutic targets for anticancer drug development.
Purpose of the Study:
- To determine the detailed structures of ERK2 in its apo form and complexed with ATP and ADP.
- To provide structural insights for designing novel ligands that inhibit ERK activity by targeting the ATP-binding pocket.
Main Methods:
- X-ray crystallography was used to determine the structures of apo-form ERK2 and its complexes with ATP and ADP.
- Structural comparison with the homolog cyclin-dependent kinase 2 was performed.
Main Results:
- The structures of apo-ERK2, ERK2-ATP complex, and ERK2-ADP complex were elucidated.
- Differences in magnesium-mediated ATP binding were observed compared to cyclin-dependent kinase 2.
- Minor conformational changes upon substrate binding were localized to active-site residues.
Conclusions:
- Structural data of ERK2-ligand complexes offer valuable information for rational drug design.
- Targeting the ATP-binding pocket of ERK1 and ERK2 is a viable strategy for developing anticancer therapeutics.
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