Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Compartment Models: Single-Compartment Model01:14

Compartment Models: Single-Compartment Model

The single-compartment model serves as a simplified representation of the human body. This model assumes that the body functions as a single, well-mixed open compartment. When a drug is administered intravenously, it enters the body and quickly distributes uniformly. The drug then undergoes biotransformation and elimination, ultimately leaving the body. The volume of this compartment is referred to as the apparent volume of distribution into which the drug can uniformly distribute. In this...
Couples: Scalar and Vector Formulation01:21

Couples: Scalar and Vector Formulation

One might wonder how the captain of a large ship can navigate through the ocean with just a turn of the steering wheel. The answer lies in the concept of two parallel forces that are equal in magnitude and opposite sense, creating a couple moment.
A couple moment is a rotational force that tends to rotate the steering wheel. The wheel's rotation can either be in a clockwise or anticlockwise direction. The right-hand rule is a helpful method for determining the direction of a couple moment. To...
Pedigree Analysis01:35

Pedigree Analysis

Overview
Insertion of Single-pass Transmembrane Proteins in the RER01:26

Insertion of Single-pass Transmembrane Proteins in the RER

Integral membrane proteins are proteins adhered to the lipid bilayer of a cell organelle or membrane. They can be of two types: transmembrane integral proteins that span the lipid bilayer and monotopic proteins that are attached to either side of the membrane but do not pass through it.
Integral transmembrane proteins possess transmembrane and extra membrane domains. The transmembrane domains are primarily made of 20-25 hydrophobic amino acids arranged in a helical secondary confirmation. These...
Relationship Formation02:12

Relationship Formation

What do you think is the single most influential factor in determining with whom you become friends and whom you form romantic relationships? You might be surprised to learn that the answer is simple: the people with whom you have the most contact. This most important factor is proximity. You are more likely to be friends with people you have regular contact with. For example, there are decades of research that shows that you are more likely to become friends with people who live in your dorm,...
One-Degree-of-Freedom System01:24

One-Degree-of-Freedom System

In mechanical engineering, one-degree-of-freedom systems form the basis of a wide range of electrical and mechanical components. Using these models, engineers can predict the behavior of various parts in a larger system, which gives them insight into how different forces interact with each other.
A one-degree-of-freedom system is defined by an independent variable that determines its state and behavior. One example of a one-degree-of-freedom system is a simple harmonic oscillator, such as a...

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Drug Development.

Alzheimer's & dementia : the journal of the Alzheimer's Association·2025
Same author

Layer-By-Layer Functionalized Gauze With Designed α-Sheet Peptides Inhibits E. coli and S. aureus Biofilm Formation.

Journal of biomedical materials research. Part A·2025
Same author

Designed De Novo α-Sheet Peptides Destabilize Bacterial Biofilms and Increase the Susceptibility of <i>E. coli</i> and <i>S. aureus</i> to Antibiotics.

International journal of molecular sciences·2024
Same author

Performance of SOBA-AD blood test in discriminating Alzheimer's disease patients from cognitively unimpaired controls in two independent cohorts.

Scientific reports·2024
Same author

Mechanistic insights into the role of amyloid-β in innate immunity.

Scientific reports·2024
Same author

A patient safety knowledge graph supporting vaccine product development.

BMC medical informatics and decision making·2024
Same journal

Battle royale optimizer for multilevel image thresholding.

The Journal of supercomputing·2025
Same journal

MOBRO: multi-objective battle royale optimizer.

The Journal of supercomputing·2025
Same journal

Optimizing inference of segmentation on high-resolution images in MLExchange.

The Journal of supercomputing·2025
Same journal

Topic sentiment analysis based on deep neural network using document embedding technique.

The Journal of supercomputing·2023
Same journal

AEGA: enhanced feature selection based on ANOVA and extended genetic algorithm for online customer review analysis.

The Journal of supercomputing·2023
Same journal

A Fechner multiscale local descriptor for face recognition.

The Journal of supercomputing·2023
See all related articles

Related Experiment Video

Updated: May 16, 2026

Executing Complexity-Increasing Queries in Relational (MySQL) and NoSQL (MongoDB and EXist) Size-Growing ISO/EN 13606 Standardized EHR Databases
07:26

Executing Complexity-Increasing Queries in Relational (MySQL) and NoSQL (MongoDB and EXist) Size-Growing ISO/EN 13606 Standardized EHR Databases

Published on: March 19, 2018

Protein Simulation Data in the Relational Model.

Andrew M Simms1, Valerie Daggett

  • 1Biomedical and Health Informatics Program, University of Washington, Box 355013, Seattle, WA 98195-5013.

The Journal of Supercomputing
|December 4, 2012
PubMed
Summary
This summary is machine-generated.

High performance computing generates massive datasets. This study details a relational database design for efficiently storing and analyzing large molecular dynamics simulation data using SQL Server.

More Related Videos

Databases to Efficiently Manage Medium Sized, Low Velocity, Multidimensional Data in Tissue Engineering
09:43

Databases to Efficiently Manage Medium Sized, Low Velocity, Multidimensional Data in Tissue Engineering

Published on: November 22, 2019

Related Experiment Videos

Last Updated: May 16, 2026

Executing Complexity-Increasing Queries in Relational (MySQL) and NoSQL (MongoDB and EXist) Size-Growing ISO/EN 13606 Standardized EHR Databases
07:26

Executing Complexity-Increasing Queries in Relational (MySQL) and NoSQL (MongoDB and EXist) Size-Growing ISO/EN 13606 Standardized EHR Databases

Published on: March 19, 2018

Databases to Efficiently Manage Medium Sized, Low Velocity, Multidimensional Data in Tissue Engineering
09:43

Databases to Efficiently Manage Medium Sized, Low Velocity, Multidimensional Data in Tissue Engineering

Published on: November 22, 2019

Area of Science:

  • Computational biology
  • Data science
  • Scientific databases

Background:

  • High-performance computing generates vast scientific data volumes.
  • Relational databases offer scalable solutions for data storage and analysis.
  • Modeling complex scientific data, like protein simulations, presents significant design challenges.

Purpose of the Study:

  • To present a dimensional design for a data warehouse.
  • To describe the relational implementation of this data warehouse.
  • To facilitate storage and analysis of molecular dynamics simulation data.

Main Methods:

  • Dimensional modeling for data warehousing.
  • Relational database implementation using SQL Server.
  • Integration strategies for simulation software and external data.

Main Results:

  • A functional and efficient data repository for molecular dynamics simulations.
  • A design accommodating large, multi-dimensional simulation data.
  • Successful implementation using SQL Server.

Conclusions:

  • Relational databases can effectively manage large-scale scientific simulation data.
  • The presented design addresses challenges in modeling protein simulation data.
  • SQL Server provides a robust platform for scientific data warehousing.