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Related Concept Videos

IR Spectroscopy: Hooke's Law Approximation of Molecular Vibration01:16

IR Spectroscopy: Hooke's Law Approximation of Molecular Vibration

A covalently bonded heteronuclear diatomic molecule can be modeled as two vibrating masses connected by a spring. The vibrational frequency of the bond can be expressed using an equation derived from Hooke's law, which describes how the force applied to stretch or compress a spring is proportional to the displacement of the spring. In this case, the atoms behave like masses, and the bond acts like a spring.
According to Hooke's law, the vibrational frequency is directly proportional to the...
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Resonance and Hybrid Structures

According to the theory of resonance, if two or more Lewis structures with the same arrangement of atoms can be written for a molecule, ion, or radical, the actual distribution of electrons is an average of that shown by the various Lewis structures.
Resonance Structures and Resonance Hybrids
The Lewis structure of a nitrite anion (NO2−) may actually be drawn in two different ways, distinguished by the locations of the N–O and N=O bonds.
MO Theory and Covalent Bonding02:40

MO Theory and Covalent Bonding

The molecular orbital theory describes the distribution of electrons in molecules in a manner similar to the distribution of electrons in atomic orbitals. The region of space in which a valence electron in a molecule is likely to be found is called a molecular orbital. Mathematically, the linear combination of atomic orbitals (LCAO) generates molecular orbitals. Combinations of in-phase atomic orbital wave functions result in regions with a high probability of electron density, while...
¹H NMR: Interpreting Distorted and Overlapping Signals01:02

¹H NMR: Interpreting Distorted and Overlapping Signals

Spin systems where the difference in chemical shifts of the coupled nuclei is greater than ten times J are called first-order spin systems. These nuclei are weakly coupled, and their chemical shifts and coupling constant can generally be estimated from the well-separated signals in the spectrum.
As Δν decreases and the signals move closer, the doublets appear increasingly distorted. The intensities of the inner lines increase at the cost of those of the outer lines as the signals are slanted or...
Valence Bond Theory02:42

Valence Bond Theory

Coordination compounds and complexes exhibit different colors, geometries, and magnetic behavior, depending on the metal atom/ion and ligands from which they are composed. In an attempt to explain the bonding and structure of coordination complexes, Linus Pauling proposed the valence bond theory, or VBT, using the concepts of hybridization and the overlapping of the atomic orbitals. According to VBT, the central metal atom or ion (Lewis acid) hybridizes to provide empty orbitals of suitable...
Valence Bond Theory02:45

Valence Bond Theory

Overview of Valence Bond Theory

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Vibrational Spectra of a N719-Chromophore/Titania Interface from Empirical-Potential Molecular-Dynamics Simulation, Solvated by a Room Temperature Ionic Liquid
08:54

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Published on: January 25, 2020

Optimized coordinates for anharmonic vibrational structure theories.

Kiyoshi Yagi1, Murat Keçeli, So Hirata

  • 1Department of Chemistry, University of Illinois at Urbana-Champaign, 600 South Mathews Avenue, Urbana, Illinois 61801, USA.

The Journal of Chemical Physics
|December 5, 2012
PubMed
Summary
This summary is machine-generated.

A new method finds optimal vibrational coordinates to improve molecular energy calculations. This approach enhances accuracy in vibrational structure methods like VSCF and VCI for various molecules.

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Atomic Scale Structural Studies of Macromolecular Assemblies by Solid-state Nuclear Magnetic Resonance Spectroscopy

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Area of Science:

  • Computational Chemistry
  • Quantum Chemistry
  • Molecular Spectroscopy

Background:

  • The vibrational self-consistent-field (VSCF) method is a key tool for calculating molecular vibrational energies.
  • Normal coordinates, while useful, do not always provide the most efficient basis for VSCF calculations, especially for anharmonic systems.
  • Previous work by Thompson and Truhlar laid groundwork for optimizing vibrational coordinates.

Purpose of the Study:

  • To develop a procedure for determining optimal vibrational coordinates that minimize VSCF energy.
  • To introduce new vibrational structure methods based on these optimized coordinates.
  • To assess the performance and accuracy improvements offered by the new methods.

Main Methods:

  • Developed a procedure to find optimal vibrational coordinates by minimizing VSCF ground-state energy.
  • Implemented a robust optimization algorithm using Jacobi matrices.
  • Introduced optimized-coordinate VSCF (oc-VSCF) and optimized-coordinate vibrational configuration interaction (oc-VCI) methods.
  • Applied and tested methods on water, water dimer, and ethylene molecules.

Main Results:

  • Optimized coordinates balance localization (high-frequency modes) and delocalization (low-frequency modes).
  • oc-VSCF outperforms standard VSCF for localized modes.
  • oc-VCI shows significantly faster convergence than VCI with respect to excitation rank.
  • Reduced mean absolute errors in vibrational frequencies for water and water dimer using oc-VCI.
  • Decreased mode coupling in ethylene's potential energy surface.

Conclusions:

  • The developed optimal vibrational coordinates offer a more efficient basis for vibrational structure calculations.
  • oc-VSCF and oc-VCI provide enhanced accuracy and faster convergence compared to traditional methods.
  • The new methods are particularly beneficial for systems with mixed vibrational characteristics (e.g., stretching and skeletal modes).