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Whole Genome Sequencing of Candida glabrata for Detection of Markers of Antifungal Drug Resistance
Published on: December 28, 2017
Distribution, virulence attributes and antifungal susceptibility patterns of Candida parapsilosis complex strains
Ilknur Tosun1, Zeynep Akyuz, Nejla Cebeci Guler
1Department of Medical Microbiology, Faculty of Medicine, Karadeniz Technical University, Trabzon, Turkey. ijune99@yahoo.com
Abstract:
It was recently proposed that Candida parapsilosis represents a complex composed of three closely related species, i.e., C. parapsilosis sensu stricto, C. orthopsilosis, and C. metapsilosis. The aim of this study was to describe the distribution of C. parapsilosis complex isolates among clinical samples. We also evaluated antifungal susceptibility profiles, in vitro presence of lipase and secreted aspartyl proteinase, as well as their ability to grow in total parenteral nutrition (TPN) solution, and biofilm production. A total of 413 non-C. albicans Candida isolates were obtained from various clinical samples between 2010 and 2011 in a Turkish Tertiary Care Hospital. Of them, 42 were identified as members of the C. parapsilosis complex. Among these, 38 (90.5%) were C. parapsilosis sensu stricto, 3 (7.1%) C. metapsilosis, and 1 (2.4%) C. orthopsilosis. All isolates recovered from blood were found to be C. parapsilosis sensu stricto and C. metapsilosis. In phenotypic tests, all 42 isolates grew in TPN solution and, although 26.2% of C. parapsilosis sensu stricto-isolates were capable of forming biofilms in vitro, neither C. orthopsilosis nor C. metapsilosis isolates were able to do so. Acid proteinase activity was detected in 31% of isolates and lipase activity in 33%. All isolates were sensitive to voriconazole, caspofungin, and anidulafungin, with only a single C. parapsilosis sensu stricto isolate showing dose-dependent susceptible to fluconazole. While the number of C. metapsilosis and C. orthopsilosis isolates remained low, there were no significant differences in antifungal MIC as compared to C. parapsilosis sensu stricto.
Insights
The Candida parapsilosis complex, including C. parapsilosis sensu stricto, C. orthopsilosis, and C. metapsilosis, was studied in clinical samples. Most isolates were C. parapsilosis sensu stricto, with varying biofilm production and universal antifungal sensitivity.
Area of Science:
- Medical Mycology
- Clinical Microbiology
- Infectious Diseases
Background:
- The Candida parapsilosis complex is increasingly recognized as comprising three distinct species.
- Understanding the distribution and characteristics of these species is crucial for effective clinical management.
Purpose of the Study:
- To investigate the prevalence of Candida parapsilosis complex species in clinical samples.
- To characterize their antifungal susceptibility, enzymatic activities, and biofilm formation.
- To assess their growth in total parenteral nutrition (TPN) solutions.
Main Methods:
- Identification of 42 Candida parapsilosis complex isolates from 413 non-Candida albicans isolates.
- Species identification using molecular or phenotypic methods.
- Phenotypic testing for lipase, secreted aspartyl proteinase, biofilm production, and growth in TPN solution.
- Antifungal susceptibility testing against various antifungal agents.
Main Results:
- Candida parapsilosis sensu stricto was the predominant species (90.5%), followed by C. metapsilosis (7.1%) and C. orthopsilosis (2.4%).
- All isolates grew in TPN solution. Biofilm formation was observed only in C. parapsilosis sensu stricto isolates (26.2%).
- Lipase and acid proteinase activities were detected in 31-33% of isolates. All isolates were highly susceptible to voriconazole, caspofungin, and anidulafungin.
Conclusions:
- Candida parapsilosis sensu stricto is the most common species within the complex in this clinical setting.
- Differences in biofilm production exist among the species, with implications for device-associated infections.
- The C. parapsilosis complex exhibits broad susceptibility to key antifungal agents, with minimal resistance observed.
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