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Updated: May 15, 2026

Monitoring Stub1-Mediated Pexophagy
Published on: May 12, 2023
Newly identified milder phenotype of peroxisome biogenesis disorder caused by mutated PEX3 gene
Shuji Matsui1, Masuko Funahashi, Ayako Honda
1Tokyo Children's Rehabilitation Hospital, Musashimurayama, Tokyo, Japan.
Abstract:
We identified the first patient with infantile Refsum disease (IRD), a milder phenotype of peroxisome biogenesis disorder (PBD) caused by a mutated PEX3, and investigated the clinical, molecular and cellular characterization in this patient. The patient presented psychomotor regression, late-onset leukodystrophy, peripheral neuropathy, hearing impairment, a renal cyst, and renal hypertension and survived until the age of 36. Furthermore, fibroblasts from the patient indicated a mosaic pattern of catalase-positive particles (peroxisomes) and numerous peroxisomal membrane structures. Molecular analysis was homozygous for the D347Y mutation and reduced gene expression of PEX3 which encodes a peroxisomal membrane protein, pex3p, involved in peroxisome assembly at the early stage of peroxisomal membrane vesicle formation, therefore, patients with a mutated PEX3 gene have been reported to have only a severe phenotype of Zellweger syndrome and no or less peroxisomal remnant membrane structure. This is not only a newly identified milder PBD caused by a mutated PEX3 gene but also the first report of a Japanese patient with IRD who had not been diagnosed until over 30years of age, which suggests there must be more variant PBD in patients with degenerative neurologic disorder, and to bring them to light is necessary.
Insights
This study details the first infantile Refsum disease (IRD) patient with a milder PEX3 mutation, presenting unique clinical and cellular findings. The discovery highlights the need to identify further PEX3 variants in neurological disorders.
Area of Science:
- Genetics and Molecular Biology
- Biochemistry
- Neurology
Background:
- Peroxisome biogenesis disorders (PBDs) are a group of severe genetic conditions affecting peroxisome formation.
- Mutations in the PEX3 gene are typically associated with severe Zellweger syndrome, characterized by minimal peroxisomal structures.
Observation:
- A Japanese patient presented with a milder phenotype of infantile Refsum disease (IRD), a PBD, surviving until age 36.
- Clinical manifestations included psychomotor regression, late-onset leukodystrophy, peripheral neuropathy, hearing impairment, and renal abnormalities.
- Patient fibroblasts showed a mosaic pattern of peroxisomes and peroxisomal membrane structures.
Findings:
- Molecular analysis revealed homozygosity for the D347Y mutation in PEX3, leading to reduced PEX3 gene expression.
- This finding contradicts previous reports, as PEX3 mutations were thought to only cause severe PBD phenotypes.
- The patient's cellular characteristics, including peroxisomal remnants, suggest a novel, milder PBD caused by PEX3 mutation.
Implications:
- This case represents the first identified milder PBD due to a PEX3 mutation and the first diagnosed late-onset IRD case in Japan.
- The findings suggest that PEX3 mutations can lead to a spectrum of PBD phenotypes, including milder forms.
- Further investigation is crucial to identify similar PEX3 variants in patients with undiagnosed degenerative neurological disorders.
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