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Related Concept Videos

Proteomics01:33

Proteomics

A proteome is the entire set of proteins that a cell type produces. We can study proteomes using the knowledge of genomes because genes code for mRNAs, and the mRNAs encode proteins. Although mRNA analysis is a step in the right direction, not all mRNAs are translated into proteins.
Proteomics is the study of proteomes' function. It involves the large-scale systematic study of the proteome to denote the protein complement expressed by a genome. Scientist Mark Wilkins coined the term proteomics...
Matrix Proteoglycans and Glycoproteins01:21

Matrix Proteoglycans and Glycoproteins

Proteoglycans are extensively glycosylated proteins, commonly found in the extracellular matrix, interwoven with collagen fibers. Hyaline cartilage, the most common type of cartilage in the body, consists of short and dispersed collagen fibers associated with large amounts of proteoglycans. These proteoglycans have long negative charges that attract cations, which in turn attract water molecules. This influx of ions and water molecules swells up the proteoglycan like a water-soaked gel that can...
Conjugated Proteins02:50

Conjugated Proteins

Simple proteins and protein complexes contain only amino acids. In contrast, many other proteins, called conjugated proteins, covalently bond with non-protein moieties.
Nucleoproteins are protein complexes that contain nucleic acids, categorized as deoxyribonucleoproteins (DNPs) or ribonucleoproteins (RNPs) respectively. The nucleosome is a typical example of a DNP where nuclear DNA is associated with histone proteins. The major antigen for the Covid-19 virus SARS-CoV is an RNP that is critical...
Conjugated Proteins02:50

Conjugated Proteins

Simple proteins and protein complexes contain only amino acids. In contrast, many other proteins, called conjugated proteins, covalently bond with non-protein moieties.
Nucleoproteins are protein complexes that contain nucleic acids, categorized as deoxyribonucleoproteins (DNPs) or ribonucleoproteins (RNPs) respectively. The nucleosome is a typical example of a DNP where nuclear DNA is associated with histone proteins. The major antigen for the Covid-19 virus SARS-CoV is an RNP that is critical...
Cross-reactivity00:42

Cross-reactivity

Overview
Protein Complexes with Interchangeable Parts01:57

Protein Complexes with Interchangeable Parts

Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...

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Related Experiment Video

Updated: May 15, 2026

RNA Interference-based Investigation of the Function of Heat Shock Protein 27 during Corneal Epithelial Wound Healing
08:34

RNA Interference-based Investigation of the Function of Heat Shock Protein 27 during Corneal Epithelial Wound Healing

Published on: September 27, 2016

Chicken corneocyte cross-linked proteome.

Robert H Rice1, Brett R Winters, Blythe P Durbin-Johnson

  • 1Department of Environmental Toxicology, University of California Davis, Davis, California 95616, USA. rhrice@ucdavis.edu

Journal of Proteome Research
|December 22, 2012
PubMed
Summary
This summary is machine-generated.

This study comprehensively analyzed chicken epidermal proteins, revealing diverse protein roles in feather, scale, beak, and claw structures. Isopeptide cross-linking is crucial for avian epithelial strength and stability.

Related Experiment Videos

Last Updated: May 15, 2026

RNA Interference-based Investigation of the Function of Heat Shock Protein 27 during Corneal Epithelial Wound Healing
08:34

RNA Interference-based Investigation of the Function of Heat Shock Protein 27 during Corneal Epithelial Wound Healing

Published on: September 27, 2016

Area of Science:

  • Proteomics
  • Avian Biology
  • Biochemistry

Background:

  • Chicken epidermal appendages like feathers, scales, beaks, and claws are vital for survival and display.
  • Understanding the proteomic composition of these structures is key to their development and function.
  • Previous analyses have not comprehensively detailed the protein content of these diverse avian keratinized structures.

Purpose of the Study:

  • To conduct a comprehensive shotgun proteomic analysis of chicken epidermal scale, feather, beak, and claw.
  • To identify and characterize the protein profiles of these distinct avian keratinized structures.
  • To investigate the role of protein fractions and cross-linking in structural integrity.

Main Methods:

  • Shotgun proteomic analysis of chicken scale, feather, beak, and claw samples.
  • Fractionation of samples into soluble and particulate components via sodium dodecyl sulfate extraction.
  • Identification of proteins using mass spectrometry.

Main Results:

  • Identified 205 proteins, including 17 keratins (α and β types), 51 involved in protein synthesis, and others like histones and heat shock proteins.
  • Observed significant overlap in protein profiles between beak and claw, while feather and scale showed distinct profiles.
  • Found that a substantial portion of proteins (34-57%) were located in the particulate fraction, indicating enrichment in structures like isopeptide cross-links.

Conclusions:

  • This study provides the first comprehensive proteomic analysis of these avian keratinized structures.
  • Proteins are efficiently utilized to provide mechanical and chemical stability to avian epidermal appendages.
  • Isopeptide cross-linking plays a critical role in the cornification process of avian epithelia.