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Updated: May 15, 2026

Real-time Imaging of Single Engineered RNA Transcripts in Living Cells Using Ratiometric Bimolecular Beacons
Published on: August 6, 2014
Selective fluorescent detection of RNA in living cells by using imidazolium-based cyclophane
Bahareh Shirinfar1, Nisar Ahmed, Yu Shin Park
1Center for Superfunctional Materials, Department of Chemistry, Pohang University of Science and Technology (POSTECH), Pohang 790-784, Korea.
Abstract:
A water-soluble imidazolium-based fluorescent chemosensor senses RNA selectively through fluorescence enhancement over other biologically relevant biomolecules in aqueous solution at physiological pH 7.4. Fluorescence image detection of RNA in living cells such as onion cells, HeLa cells, and animal model cells was successfully demonstrated which displays a chelation-enhanced fluorescence effect. These affinities can be attributed to the strong electrostatic (C-H)(+)···A(-) ionic H-bonding and the aromatic moiety driven π-stacking of imidazolium-based cyclophane with the size-complementary major groove of RNA.

