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Updated: May 15, 2026

Differentiation of a Human Neural Stem Cell Line on Three Dimensional Cultures, Analysis of MicroRNA and Putative Target Genes
Published on: April 12, 2015
microRNA-29b is a novel mediator of Sox2 function in the regulation of somatic cell reprogramming
Xudong Guo1, Qidong Liu, Guiying Wang
1Clinical and Translational Research Center of Shanghai First Maternity & Infant Health Hospital, Shanghai Key Laboratory of Signaling and Disease Research, School of Life Science and Technology, Tongji University, 1239 Siping Road, Shanghai 200092, China.
Abstract:
Fibroblasts can be reprogrammed into induced pluripotent stem cells (iPSCs) by the application of Yamanaka factors (OSKM), but the mechanisms underlying this reprogramming remain poorly understood. Here, we report that Sox2 directly regulates endogenous microRNA-29b (miR-29b) expression during iPSC generation and that miR-29b expression is required for OSKM- and OSK-mediated reprogramming. Mechanistic studies show that Dnmt3a and Dnmt3b are in vivo targets of miR-29b and that Dnmt3a and Dnmt3b expression is inversely correlated with miR-29b expression during reprogramming. Moreover, the effect of miR-29b on reprogramming can be blocked by Dnmt3a or Dnmt3b overexpression. Further experiments indicate that miR-29b-DNMT signaling is significantly involved in the regulation of DNA methylation-related reprogramming events, such as mesenchymal-to-epithelial transition (MET) and Dlk1-Dio3 region transcription. Thus, our studies not only reveal that miR-29b is a novel mediator of reprogramming factor Sox2 but also provide evidence for a multistep mechanism in which Sox2 drives a miR-29b-DNMT signaling axis that regulates DNA methylation-related events during reprogramming.
Insights
Sox2 regulates microRNA-29b (miR-29b) during induced pluripotent stem cell (iPSC) generation. This miR-29b then targets DNA methyltransferases (DNMTs), impacting DNA methylation and reprogramming efficiency.
Area of Science:
- Stem cell biology
- Epigenetics
- Molecular mechanisms of reprogramming
Background:
- Fibroblast reprogramming into induced pluripotent stem cells (iPSCs) is crucial for regenerative medicine.
- The precise molecular mechanisms governing this cellular reprogramming are not fully elucidated.
Purpose of the Study:
- To investigate the role of Sox2 and microRNA-29b (miR-29b) in the reprogramming process.
- To elucidate the downstream targets and signaling pathways regulated by miR-29b during iPSC generation.
Main Methods:
- Analysis of Sox2's direct regulation of miR-29b expression.
- Investigating miR-29b's requirement for OSKM- and OSK-mediated reprogramming.
- Identifying in vivo targets of miR-29b using mechanistic studies.
- Assessing the impact of miR-29b and DNA methyltransferases (DNMTs) on DNA methylation events like MET and Dlk1-Dio3 transcription.
Main Results:
- Sox2 directly regulates endogenous miR-29b expression during iPSC generation.
- miR-29b is essential for OSKM- and OSK-induced reprogramming.
- Dnmt3a and Dnmt3b were identified as in vivo targets of miR-29b.
- miR-29b expression is inversely correlated with Dnmt3a and Dnmt3b levels during reprogramming.
- Overexpression of Dnmt3a or Dnmt3b can block the reprogramming effects of miR-29b.
- The miR-29b-DNMT signaling pathway regulates DNA methylation events, including MET and Dlk1-Dio3 transcription.
Conclusions:
- miR-29b acts as a novel mediator regulated by the reprogramming factor Sox2.
- Sox2 initiates a miR-29b-DNMT signaling axis that controls DNA methylation-related events during reprogramming.
- This study reveals a multistep mechanism essential for efficient iPSC generation.
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