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Published on: December 19, 2018
FoxA1 specifies unique androgen and glucocorticoid receptor binding events in prostate cancer cells
Biswajyoti Sahu1, Marko Laakso, Päivi Pihlajamaa
1Institute of Biomedicine and Research Programs Unit, Genome-Scale Biology, Biomedicum Helsinki, University of Helsinki, Finland.
Abstract:
The forkhead protein FoxA1 has functions other than a pioneer factor, in that its depletion brings about a significant redistribution in the androgen receptor (AR) and glucocorticoid receptor (GR) cistromes. In this study, we found a novel function for FoxA1 in defining the cell-type specificity of AR- and GR-binding events in a distinct fashion, namely, for AR in LNCaP-1F5 cells and for GR in VCaP cells. We also found different, cell-type and receptor-specific compilations of cis-elements enriched adjacent to the AR- and GR-binding sites. The AR pathway is central in prostate cancer biology, but the role of GR is poorly known. We find that AR and GR cistromes and transcription programs exhibit significant overlap, and GR regulates a large number of genes considered to be AR pathway-specific. This raises questions about the role of GR in maintaining the AR pathway under androgen-deprived conditions in castration-resistant prostate cancer patients. However, in the presence of androgen, ligand-occupied GR acts as a partial antiandrogen and attenuates the AR-dependent transcription program. .
Insights
Forkhead protein FoxA1 influences androgen receptor (AR) and glucocorticoid receptor (GR) binding sites, revealing cell-type specificity. GR significantly overlaps with AR targets, impacting prostate cancer pathways.
Area of Science:
- Endocrinology
- Molecular Biology
- Cancer Research
Background:
- The forkhead protein FoxA1 is known as a pioneer factor.
- FoxA1 depletion causes significant redistribution of androgen receptor (AR) and glucocorticoid receptor (GR) cistromes.
Purpose of the Study:
- To investigate the novel function of FoxA1 in defining cell-type specificity for AR and GR binding.
- To explore the interplay between AR and GR in prostate cancer, particularly the role of GR.
Main Methods:
- ChIP-sequencing to map AR and GR binding sites.
- Analysis of cis-element enrichment near binding sites.
- Gene expression analysis to assess transcription programs.
Main Results:
- FoxA1 dictates cell-type-specific AR binding in LNCaP-1F5 cells and GR binding in VCaP cells.
- Distinct cis-element compositions are associated with AR and GR binding sites.
- Significant overlap exists between AR and GR cistromes and transcription programs.
- GR regulates AR-specific genes and can attenuate AR activity in the presence of androgen.
Conclusions:
- FoxA1 plays a crucial role beyond pioneering, influencing AR and GR cistrome specificity.
- GR's extensive overlap with AR targets suggests a significant role in prostate cancer, potentially in castration resistance.
- Ligand-bound GR acts as a partial antiandrogen, modulating AR-dependent transcription.
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