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Updated: May 15, 2026

Quantifying Yersinia pseudotuberculosis Type III Secretion System Activity Following Iron Starvation and Anaerobic Growth
Published on: May 31, 2024
Structure and function of cytidine monophosphate kinase from Yersinia pseudotuberculosis, essential for virulence but
Nicola J Walker1, Elizabeth A Clark, Donna C Ford
1Biomedical Sciences, Defence Science and Technology Laboratory, Porton Down, Salisbury SP4 0JQ, UK.
Abstract:
The need for new antibiotics has become pressing in light of the emergence of antibiotic-resistant strains of human pathogens. Yersinia pestis, the causative agent of plague, is a public health threat and also an agent of concern in biodefence. It is a recently emerged clonal derivative of the enteric pathogen Yersinia pseudotuberculosis. Previously, we developed a bioinformatic approach to identify proteins that may be suitable targets for antimicrobial therapy and in particular for the treatment of plague. One such target was cytidine monophosphate (CMP) kinase, which is an essential gene in some organisms. Previously, we had thought CMP kinase was essential for Y. pseudotuberculosis, but by modification of the mutagenesis approach, we report here the production and characterization of a Δcmk mutant. The isogenic mutant had a growth defect relative to the parental strain, and was highly attenuated in mice. We have also elucidated the structure of the CMP kinase to 2.32 Å, and identified three key residues in the active site that are essential for activity of the enzyme. These findings will have implications for the development of novel CMP kinase inhibitors for therapeutic use.
Insights
Researchers identified cytidine monophosphate (CMP) kinase as a potential target for new antibiotics against plague. A mutant lacking CMP kinase showed reduced growth and was less virulent in mice, paving the way for new drug development.
Area of Science:
- Microbiology
- Biochemistry
- Drug Discovery
Background:
- The rise of antibiotic-resistant pathogens necessitates novel antimicrobial therapies.
- Yersinia pestis, the plague bacterium, poses significant public health and biodefence risks.
- Cytidine monophosphate (CMP) kinase was previously identified as a potential therapeutic target.
Purpose of the Study:
- To investigate the essentiality of CMP kinase in Yersinia pestis.
- To characterize a Yersinia pestis mutant lacking CMP kinase (Δcmk).
- To determine the structural basis for CMP kinase activity.
Main Methods:
- Genetic modification to create a Δcmk mutant.
- Phenotypic characterization of the mutant, including growth assays and mouse infection models.
- X-ray crystallography to determine CMP kinase structure.
Main Results:
- A Yersinia pestis Δcmk mutant was successfully generated and characterized.
- The mutant exhibited a significant growth defect and was highly attenuated in a mouse model.
- The crystal structure of CMP kinase was elucidated to 2.32 Å, revealing key active site residues essential for enzyme function.
Conclusions:
- CMP kinase is essential for Yersinia pestis virulence and survival.
- The structural insights into CMP kinase provide a foundation for designing targeted inhibitors.
- These findings support the development of novel antibiotics against plague by targeting CMP kinase.
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