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Updated: May 15, 2026

Detecting Pre-Stimulus Source-Level Effects on Object Perception with Magnetoencephalography
Published on: July 26, 2019
Non-parametric statistical thresholding for sparse magnetoencephalography source reconstructions
Julia P Owen1, Kensuke Sekihara, Srikantan S Nagarajan
1Biomagnetic Imaging Laboratory, Department of Radiology and Biomedical Imaging, University of California San Francisco San Francisco, CA, USA ; Joint Graduate Group in Bioengineering, University of California San Francisco/University of California Berkeley San Francisco, CA, USA.
Abstract:
Uncovering brain activity from magnetoencephalography (MEG) data requires solving an ill-posed inverse problem, greatly confounded by noise, interference, and correlated sources. Sparse reconstruction algorithms, such as Champagne, show great promise in that they provide focal brain activations robust to these confounds. In this paper, we address the technical considerations of statistically thresholding brain images obtained from sparse reconstruction algorithms. The source power distribution of sparse algorithms makes this class of algorithms ill-suited to "conventional" techniques. We propose two non-parametric resampling methods hypothesized to be compatible with sparse algorithms. The first adapts the maximal statistic procedure to sparse reconstruction results and the second departs from the maximal statistic, putting forth a less stringent procedure that protects against spurious peaks. Simulated MEG data and three real data sets are utilized to demonstrate the efficacy of the proposed methods. Two sparse algorithms, Champagne and generalized minimum-current estimation (G-MCE), are compared to two non-sparse algorithms, a variant of minimum-norm estimation, sLORETA, and an adaptive beamformer. The results, in general, demonstrate that the already sparse images obtained from Champagne and G-MCE are further thresholded by both proposed statistical thresholding procedures. While non-sparse algorithms are thresholded by the maximal statistic procedure, they are not made sparse. The work presented here is one of the first attempts to address the problem of statistically thresholding sparse reconstructions, and aims to improve upon this already advantageous and powerful class of algorithm.
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