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Updated: May 15, 2026

Inverse Probability of Treatment Weighting (Propensity Score) using the Military Health System Data Repository and National Death Index
Published on: January 8, 2020
Stratification of randomization is not required for a pre-specified subgroup analysis
1Genentech, Inc., 1 DNA Way, South San Francisco, CA 94080, USA. lkaiser@gene.com
Stratified randomization is not essential for valid subgroup analyses in clinical trials. Unstratified methods ensure treatment balance and unbiased effect estimation, supporting personalized medicine innovation.
Area of Science:
- Clinical Trials Methodology
- Biostatistics
- Pharmacogenomics
Background:
- Conflicting recommendations exist regarding the necessity of stratified randomization for subgroup analyses in clinical trials.
- Subgroup analyses are crucial for demonstrating drug efficacy, particularly for companion diagnostic development.
Purpose of the Study:
- To evaluate the validity of subgroup analyses using typical randomization methods without subgroup stratification.
- To assess the impact of unstratified randomization on treatment balance and covariate distribution within subgroups.
Main Methods:
- Analysis of typical randomization methods to determine patient fractions within subgroups.
- Examination of covariate balance between treatment arms within subgroups.
- Application of analysis of variance to assess treatment effect estimators.
Main Results:
- The fraction of patients receiving experimental treatment in subgroups closely matches the target fraction.
- Covariate values are balanced on average between treatment arms within subgroups.
- Variance in covariate imbalance is only slightly increased compared to stratified randomization.
- Least-squares treatment effect estimators within subgroups are unbiased regardless of stratification.
Conclusions:
- Stratified randomization is not a prerequisite for valid subgroup analyses.
- Current randomization methods adequately support subgroup analyses, ensuring treatment balance and unbiased estimates.
- Requiring subgroup stratification poses an unnecessary barrier to innovation in personalized healthcare and drug development.
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