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Updated: May 15, 2026

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Mouse Genome Engineering Using Designer Nucleases
Published on: April 2, 2014
Efficient targeted mutagenesis in medaka using custom-designed transcription activator-like effector nucleases
Satoshi Ansai1, Tetsushi Sakuma, Takashi Yamamoto
1Division of Applied Bioscience, Graduate School of Agriculture Kyoto University, Sakyo-ku, Kyoto, Japan.
Genetics
|January 5, 2013
Summary
Transcription activator-like effector nucleases (TALENs) enable efficient targeted genome editing in medaka fish. This study establishes TALENs for rapid generation of DJ-1 gene knockout medaka, advancing their use as a vertebrate model.
Area of Science:
- Genetics and Genomics
- Molecular Biology
- Developmental Biology
Background:
- Transcription activator-like effector nucleases (TALENs) are advanced tools for targeted genome editing.
- Medaka fish (Oryzias latipes) are valuable vertebrate models for genetic and genomic research.
Purpose of the Study:
- To demonstrate efficient targeted mutagenesis in medaka using TALENs.
- To establish a method for rapidly generating knockout medaka strains.
- To investigate the DJ-1 gene and its protein function in medaka.
Main Methods:
- Design and construction of TALENs targeting the medaka DJ-1 gene.
- Injection of TALENs into medaka embryos to induce mutations.
- Analysis of mutations in injected embryos and subsequent generations (G0 and F1).
- Assessment of DJ-1 protein expression in mutated fish.
Main Results:
- TALENs induced targeted insertions and deletions (indels) in the medaka DJ-1 gene with high efficiency in a dose-dependent manner.
- TALEN-induced mutations were efficiently transmitted to the next generation (44-100% of G0 fish).
- Site-specific mutations were confirmed, with no detectable off-target mutations.
- DJ-1 protein was absent in medaka homozygous for TALEN-induced frameshift mutations.
- Specific N- and C-terminal regions of the TAL effector domain were identified as crucial for gene-disrupting activity.
Conclusions:
- TALEN technology provides an efficient and rapid method for generating knockout medaka strains.
- This study represents the first report of TALEN-mediated targeted mutagenesis in medaka.
- TALENs significantly enhance the utility of medaka as a model organism for genetic and genomic studies.
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In-vitro Mutagenesis
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Because the DNA segments are cut and reorganized in a direction-specific manner, site-specific recombination has emerged as an efficient genetic engineering technique. Flippase and Cyclization recombinases or Flp and Cre, respectively, are two members of the tyrosine recombinase family derived from bacteriophages, that are used to mediate site-specific DNA insertions, deletions, and targeted expression of proteins in mammalian cell lines.
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