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Related Concept Videos

Prochirality02:05

Prochirality

The concept of prochirality leads to the nomenclature of the individual faces of a molecule and plays a crucial role in the enantioselective reaction. It is a concept where two or more achiral molecules react to produce chiral products. A typical process is the reaction of an achiral ketone to generate a chiral alcohol. Here, the achiral reactant reacts with an achiral reducing agent, sodium borohydride, to generate an equimolar mixture of the chiral enantiomers of the product. For example, an...
Structure of Amines01:19

Structure of Amines

The hybridized nitrogen atom in amines possesses a lone pair of electrons and is bound to three substituents with a bond angle of around 108°, which is less than the tetrahedral angle of 109.5°. However, the C–N–H bond angle is slightly larger at 112°, with a carbon–nitrogen bond length of 147 pm. This carbon–nitrogen bond length of of amines is longer than the carbon–oxygen bond of alcohols (143 pm) but shorter than alkanes’ carbon–carbon bond (154 pm). These aspects are illustrated in Figure...
Chirality at Nitrogen, Phosphorus, and Sulfur02:30

Chirality at Nitrogen, Phosphorus, and Sulfur

Chirality is most prevalent in carbon-based tetrahedral compounds, but this important facet of molecular symmetry extends to sp3-hybridized nitrogen, phosphorus and sulfur centers, including trivalent molecules with lone pairs. Here, the lone pair behaves as a functional group in addition to the other three substituents to form an analogous tetrahedral center that can be chiral.
A consequence of chirality is the need for enantiomeric resolution. While this is theoretically possible for all...
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In the presence of an aqueous base and a halogen, primary amides can lose the carbonyl (as carbon dioxide) and undergo rearrangement to form primary amines. This reaction, called the Hofmann rearrangement, can produce primary amines (aryl and alkyl) in high yields without contamination by secondary and tertiary amines.

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Biochemical and Structural Characterization of the Carbohydrate Transport Substrate-binding-protein SP0092
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Structure revision of asperjinone using computer-assisted structure elucidation methods.

Mikhail Elyashberg1, Kirill Blinov, Sergey Molodtsov

  • 1Advanced Chemistry Development, Moscow Department, 6 Akademik Bakulev Street, Moscow 117513, Russian Federation.

Journal of Natural Products
|January 8, 2013
PubMed
Summary
This summary is machine-generated.

The structure of natural product asperjinone was revised using the Structure Elucidator expert system. Comparison with similar compounds confirmed the new structure, correcting previous findings.

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Area of Science:

  • Natural Product Chemistry
  • Computational Chemistry
  • Organic Chemistry

Background:

  • Asperjinone is a natural product isolated from thermophilic Aspergillus terreus.
  • Previous structural elucidation of asperjinone (1) required revision.

Purpose of the Study:

  • To revise the elucidated structure of asperjinone (1).
  • To confirm the reliability of the revised structure (2).

Main Methods:

  • Utilized the expert system Structure Elucidator for structural revision.
  • Compared the revised structure with 180 known structures containing the (3,3-dimethyloxiran-2-yl)methyl fragment (3).

Main Results:

  • The structure of asperjinone (1) was revised to a new structure (2).
  • Chemical shifts of known compounds contradicted the initially suggested structure (1).
  • The revised structure (2) demonstrated reliability through comparative analysis.

Conclusions:

  • The Structure Elucidator expert system successfully revised the asperjinone structure.
  • The revised structure (2) is a more accurate representation of the natural product.
  • This study highlights the importance of computational tools in natural product chemistry.