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Updated: May 15, 2026

Array Comparative Genomic Hybridization (Array CGH) for Detection of Genomic Copy Number Variants
Published on: February 21, 2015
The utility of chromosomal microarray analysis in developmental and behavioral pediatrics
1Baylor College of Medicine. abeaudet@bcm.edu
Chromosomal microarray analysis (CMA) is a key genetic test for developmental disabilities. It detects copy number variants (CNVs) like microdeletions and microduplications, replacing older methods for diagnosing conditions such as intellectual disability and autism.
Area of Science:
- Genetics
- Developmental Biology
Background:
- Chromosomal microarray analysis (CMA) is increasingly utilized for diagnosing developmental disabilities.
- Genomic abnormalities, including copy number variants (CNVs), are implicated in various neurodevelopmental disorders.
Purpose of the Study:
- To highlight the role of CMA in identifying genomic abnormalities in developmental disabilities.
- To compare CMA with traditional genetic testing methods.
Main Methods:
- CMA encompasses array comparative genomic hybridization (CGH) and single nucleotide polymorphism (SNP) arrays.
- These methods detect genomic copy number variants (CNVs), such as microdeletions and microduplications.
Main Results:
- CMA is highly effective in detecting disease-causing CNVs, particularly in children with moderate to severe intellectual disability (20%-25%).
- Disease-causing CNVs are identified in 5%-10% of autism cases, with higher prevalence in severe phenotypes.
- CMA has become the preferred first-tier genetic test for evaluating developmental and behavioral disabilities, superseding Giemsa-banded karyotype.
Conclusions:
- CMA is a powerful tool for diagnosing developmental disabilities by identifying genomic abnormalities.
- Its superior diagnostic yield makes it the recommended first-line genetic evaluation for affected children.
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