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Updated: May 15, 2026

Continuous Fluorescence-Based Endonuclease-Coupled DNA Methylation Assay to Screen for DNA Methyltransferase Inhibitors
Published on: August 5, 2022
Dnmt3b is a haploinsufficient tumor suppressor gene in Myc-induced lymphomagenesis
Aparna Vasanthakumar1, Janet B Lepore, Matthew H Zegarek
1Section of Hematology/Oncology, Department of Medicine, The University of Chicago, Chicago, IL 60637, USA.
Abstract:
The drivers of abnormal DNA methylation in human cancers include widespread aberrant splicing of the DNMT3B gene, producing abnormal transcripts that encode truncated proteins that may act as dominant negative isoforms. To test whether reduced Dnmt3b dosage can alter tumorigenesis, we bred Dnmt3b(+/-) mice to Eµ-Myc mice, a mouse model susceptible to B-cell lymphomas. Eµ-Myc/Dnmt3b(+/-) mice showed a dramatic acceleration of lymphomagenesis, greater even than that observed in Eµ-Myc mice that express a truncated DNMT3B isoform found in human tumors, DNMT3B7. This finding indicates that Dnmt3b can act as a haploinsufficient tumor suppressor gene. Although reduction in both Dnmt3b dosage and expression of DNMT3B7 within the Eµ-Myc system had similar effects on tumorigenesis and DNA hypermethylation, different molecular mechanisms appear to underlie these changes. This study offers insight into how de novo DNA methyltransferases function as tumor suppressors and the sensitivity of Myc-induced lymphomas to DNA methylation.
Insights
Reduced DNA methyltransferase 3B (DNMT3B) dosage accelerates cancer development in mice, indicating DNMT3B acts as a tumor suppressor. Aberrant splicing and haploinsufficiency both impact cancer progression.
Area of Science:
- Oncology
- Epigenetics
- Molecular Biology
Background:
- Aberrant DNA methylation is a hallmark of human cancers.
- Abnormal splicing of the DNA methyltransferase 3B (DNMT3B) gene produces truncated proteins, potentially acting as dominant-negative isoforms.
- The role of DNMT3B dosage in tumorigenesis requires further investigation.
Purpose of the Study:
- To investigate whether reduced DNMT3B dosage influences cancer development.
- To compare the effects of DNMT3B haploinsufficiency and a truncated DNMT3B isoform (DNMT3B7) on lymphomagenesis.
Main Methods:
- Breeding of Dnmt3b(+/-) mice with Eµ-Myc mice, a model for B-cell lymphomas.
- Analysis of lymphomagenesis acceleration in Eµ-Myc/Dnmt3b(+/-) mice.
- Comparison of molecular mechanisms underlying changes in tumorigenesis and DNA methylation.
Main Results:
- Eµ-Myc/Dnmt3b(+/-) mice exhibited significantly accelerated lymphomagenesis compared to Eµ-Myc mice.
- This acceleration was even greater than in Eµ-Myc mice expressing the DNMT3B7 isoform.
- Both reduced Dnmt3b dosage and DNMT3B7 expression similarly affected tumorigenesis and DNA hypermethylation, but via distinct molecular pathways.
Conclusions:
- Dnmt3b functions as a haploinsufficient tumor suppressor gene.
- Both reduced gene dosage and truncated isoforms of DNMT3B impact cancer progression.
- Myc-induced lymphomas are sensitive to alterations in DNA methylation, providing insights into epigenetic regulation in cancer.
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