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A unique IBMPFD-related P97/VCP mutation with differential binding pattern and subcellular localization
Yalcin Erzurumlu1, Fadime Aydin Kose, Oguz Gozen
1Ege University, Faculty of Pharmacy, Biochemistry Department, Izmir, Turkey.
Abstract:
p97/VCP is a hexameric AAA type ATPase that functions in a variety of cellular processes such as endoplasmic reticulum associated degradation (ERAD), organelle biogenesis, autophagy and cell-cycle regulation. Inclusion body myopathy associated with Paget disease of the bone and frontotemporal dementia (IBMPFD) is an autosomal dominant disorder which has been attributed to mutations in p97/VCP. Several missense mutations affecting twelve different amino acids have been identified in IBMPFD patients and some of them were suggested to be involved in the observed pathology. Here, we analyzed the effect of all twelve p97/VCP variants on ERAD substrates and their cofactor binding abilities. While all mutants cause ERAD substrate accumulation, P137L mutant p97/VCP differs from other IBMPFD mutants by having a unique solubility profile and subcellular localization. Intriguingly, although almost all mutants exhibit enhanced p47 and Ufd1-Npl4 binding, the P137L mutation completely abolishes p97/VCP interactions with Ufd1, Npl4 and p47, while retaining its gp78 binding. While recombinant R155C mutant protein consistently interacts with both Ufd1 and VIM of gp78, P137L mutant protein lost binding ability to Ufd1 but not to VIM in vitro. The differential impairments in p97/VCP interactions with its functional partners and function should help our understanding of the molecular pathogenesis of IBMPFD.
Insights
Mutations in p97/VCP cause IBMPFD. The P137L variant uniquely disrupts cofactor binding and localization, offering insights into disease mechanisms.
Area of Science:
- Biochemistry
- Molecular Biology
- Genetics
Background:
- p97/VCP (Valosin-containing protein) is a crucial AAA-ATPase involved in protein degradation pathways like ERAD.
- Mutations in p97/VCP cause the autosomal dominant disorder IBMPFD (Inclusion body myopathy with Paget's disease of the bone and frontotemporal dementia).
Purpose of the Study:
- To investigate the functional impact of twelve IBMPFD-associated p97/VCP missense mutations on ERAD and cofactor interactions.
- To characterize the unique properties of the P137L mutant.
Main Methods:
- Analysis of ERAD substrate accumulation in cells expressing p97/VCP variants.
- In vitro binding assays to assess interactions with cofactors p47, Ufd1-Npl4, and gp78.
- Assessment of protein solubility and subcellular localization for the P137L mutant.
Main Results:
- All twelve p97/VCP mutants caused ERAD substrate accumulation.
- Most mutants showed enhanced binding to p47 and Ufd1-Npl4.
- The P137L mutant displayed altered solubility, localization, and a complete loss of binding to Ufd1, Npl4, and p47, while retaining gp78 binding.
- The R155C mutant retained binding to Ufd1 and gp78 (VIM), unlike P137L.
Conclusions:
- Differential impairments in p97/VCP interactions with its partners contribute to IBMPFD pathogenesis.
- The P137L mutation's unique disruption of cofactor binding and cellular behavior provides specific insights into disease mechanisms.
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