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MacPROT: a set of BASIC programs for protein structure analysis.

A Lüttke

    Computer Methods and Programs in Biomedicine
    |February 1, 1990
    PubMed
    Summary
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    MacPROT offers seven interactive programs for protein sequence analysis, including hydropathy and helix wheel plots. This accessible software, written in BASIC for Macintosh, allows easy storage, editing, and analysis of protein data.

    Area of Science:

    • Bioinformatics
    • Computational Biology
    • Molecular Biology

    Background:

    • Protein sequence analysis is crucial for understanding protein function and structure.
    • Existing tools may lack interactivity or accessibility for researchers.
    • The need for user-friendly software for protein data management and analysis.

    Purpose of the Study:

    • To introduce MacPROT, a comprehensive software package for protein sequence analysis.
    • To provide interactive tools for visualizing and analyzing protein sequence data.
    • To offer an adaptable and accessible platform for molecular biology research.

    Main Methods:

    • Development of seven interactive application programs and a coordinating menu.
    • Implementation of analyses for hydropathy, amphilicity, helix wheel, and dot matrix comparison.

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  • Utilizing BASIC programming language for the Apple Macintosh platform.

    • Main Results:

    • MacPROT enables interactive storage, editing, and analysis of protein sequences.
    • Graphical plotting of analysis results (e.g., hydropathy, helix wheel) directly on screen.
    • Immediate printing or transfer of graphical data to other applications.

    Conclusions:

    • MacPROT provides a versatile and user-friendly solution for protein sequence analysis.
    • The accessible source code allows for adaptation to different computing environments.
    • This software facilitates efficient data handling and visualization in molecular biology studies.