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Updated: May 14, 2026

Identification of Kinase-substrate Pairs Using High Throughput Screening
Published on: August 29, 2015
Receptor protein tyrosine phosphatase-receptor tyrosine kinase substrate screen identifies EphA2 as a target for LAR
1Department of Pharmacology, Yale University School of Medicine, New Haven, Connecticut, USA.
Abstract:
Receptor tyrosine kinases (RTKs) exist in equilibrium between tyrosyl-phosphorylated and dephosphorylated states. Despite a detailed understanding of how RTKs become tyrosyl phosphorylated, much less is known about RTK tyrosyl dephosphorylation. Receptor protein tyrosine phosphatases (RPTPs) can play essential roles in the dephosphorylation of RTKs. However, a complete understanding of the involvement of the RPTP subfamily in RTK tyrosyl dephosphorylation has not been established. In this study, we have employed a small interfering RNA (siRNA) screen to identify RPTPs in the human genome that serve as RTK phosphatases. We observed that each RPTP induced a unique fingerprint of tyrosyl phosphorylation among 42 RTKs. We identified EphA2 as a novel LAR substrate. LAR dephosphorylated EphA2 at phosphotyrosyl 930, uncoupling Nck1 from EphA2 and thereby attenuating EphA2-mediated cell migration. These results demonstrate that each RPTP exerts a unique regulatory fingerprint of RTK tyrosyl dephosphorylation and suggest a complex signaling interplay between RTKs and RPTPs. Furthermore, we observed that LAR modulates cell migration through EphA2 site-specific dephosphorylation.
Insights
Receptor protein tyrosine phosphatases (RPTPs) regulate receptor tyrosine kinase (RTK) dephosphorylation, with each RPTP uniquely impacting RTK signaling. LAR was identified as a phosphatase for EphA2, modulating cell migration.
Area of Science:
- Cellular signaling
- Molecular biology
- Biochemistry
Background:
- Receptor tyrosine kinases (RTKs) are crucial in cell signaling, existing in a balance of phosphorylation and dephosphorylation.
- While RTK phosphorylation is well-understood, the mechanisms of RTK dephosphorylation, particularly by receptor protein tyrosine phosphatases (RPTPs), remain less clear.
Purpose of the Study:
- To identify RPTPs involved in RTK dephosphorylation using a genome-wide siRNA screen.
- To elucidate the specific roles of RPTPs in regulating RTK activity and downstream signaling pathways.
Main Methods:
- Genome-wide small interfering RNA (siRNA) screen to identify RPTPs acting as RTK phosphatases.
- Analysis of RPTP-induced changes in tyrosyl phosphorylation patterns across 42 RTKs.
- Biochemical validation of LAR as an EphA2 phosphatase.
Main Results:
- Each RPTP exhibited a distinct dephosphorylation "fingerprint" across a panel of 42 RTKs.
- EphA2 was identified as a novel substrate for the RPTP LAR.
- LAR specifically dephosphorylated EphA2 at phosphotyrosine 930, disrupting Nck1 binding and reducing EphA2-mediated cell migration.
Conclusions:
- RPTPs exert unique regulatory control over RTK tyrosyl dephosphorylation, indicating a complex interplay between these two signaling families.
- LAR-mediated, site-specific dephosphorylation of EphA2 is a key mechanism for modulating cell migration.
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