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Published on: September 27, 2024
Human Tim-Tipin complex affects the biochemical properties of the replicative DNA helicase and DNA polymerases
Won-Ho Cho1, Young-Hoon Kang, Yun-Young An
1Department of Biology Education, Seoul National University, Seoul 151-748, Korea.
Abstract:
Tim (Timeless) and Tipin (Tim-interacting protein) form a stable heterodimeric complex that influences checkpoint responses and replication fork progression. We report that the Tim-Tipin complex interacts with essential replication fork proteins and affects their biochemical properties. The Tim-Tipin complex, reconstituted and purified using the baculovirus expression system, interacts directly with Mcm complexes and inhibits the single-stranded DNA-dependent ATPase activities of the Mcm2-7 and Mcm4/6/7 complexes, the DNA unwinding activity of the Mcm4/6/7 complex, and the DNA unwinding and ATPase activity of Cdc45-Mcm2-7-GINS complex, the presumed replicative DNA helicase in eukaryotes. Although stable interactions between Tim-Tipin and DNA polymerases (pols) were not observed in immunoprecipitation experiments with purified proteins, Tim was shown to interact with DNA pols α, δ, and ε in cells. Furthermore, the Tim-Tipin complex significantly stimulated the pol activities of DNA pols α, δ, and ε in vitro. The effects of Tim-Tipin on the catalytic activities of the Mcm complexes and DNA pols are mediated by the Tim protein alone, and distinct regions of the Tim protein are responsible for the inhibition of Mcm complex activities and stimulation of DNA pols. These results suggest that the Tim-Tipin complex might play a role in coupling DNA unwinding and DNA synthesis by directly affecting the catalytic activities of replication fork proteins.
Insights
The Tim-Tipin complex directly impacts DNA replication fork proteins. It inhibits Mcm complex activity while stimulating DNA polymerases, suggesting a role in coordinating DNA unwinding and synthesis.
Area of Science:
- Molecular Biology
- DNA Replication
- Protein-Protein Interactions
Background:
- The Tim-Tim-interacting protein (Tipin) complex is crucial for DNA replication and checkpoint control.
- Understanding how Tim-Tipin interacts with and regulates replication fork machinery is essential.
Purpose of the Study:
- To investigate the biochemical interactions between the Tim-Tipin complex and key replication fork proteins.
- To determine the effects of Tim-Tipin on the enzymatic activities of Mcm complexes and DNA polymerases.
Main Methods:
- Reconstitution and purification of the Tim-Tipin complex using a baculovirus expression system.
- Biochemical assays to measure ATPase and DNA unwinding activities of Mcm complexes.
- In vitro assays to assess the impact of Tim-Tipin on DNA polymerase activities.
Main Results:
- The Tim-Tipin complex directly binds to Mcm complexes, inhibiting their ATPase and DNA unwinding activities.
- Tim-Tipin stimulates the activities of DNA polymerases α, δ, and ε.
- The Tim protein alone mediates these effects, with distinct regions responsible for Mcm inhibition and polymerase stimulation.
Conclusions:
- The Tim-Tipin complex plays a regulatory role at the replication fork by modulating the activities of both helicases (Mcm) and polymerases.
- This complex may function to couple DNA unwinding and synthesis, ensuring efficient and accurate DNA replication.
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