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[Study on types of M protein gene in group A streptococcus isolated from children in Beijing, 2011]
Jing Li1, Shuang Liu, Xiao-min Peng
1School of Public Health and Family Medicine, Capital Medical University, Beijing 100069, China.
Objective:
To explore the distribution characteristics of the types of M protein gene (emm) in group A streptococcus (GAS) isolated from children in Beijing in the year 2011.
Methods:
During May to July in 2011, a total of 3315 patients who were diagnosed scarlet fever or pharyngeal infection by doctors in pediatric outpatient and emergency units of 36 hospitals, were selected as subjects. Their throat swab samples were collected and isolated the strains of GAS. Gene emm was then amplified and sequenced by PCR method, and the differences in types of gene emm between different populations and diseases were compared.
Results:
A total of 633 strains of GAS were isolated from the 3315 throat swab samples, 610 strains out of which were gene emm positive and were recruited in the study. Out of the 610 recruited strains, 448 (73.4%) were isolated from scarlet fever patients, the other 162 (26.6%) were isolated from pharyngeal infection patients; 397 (65.1%) were from urban, the other 213 (34.9%) were from suburb; 240 (39.4%) were from patients aging between 1 - 5 years old, the other 369(60.6%) were from patients aging 6 - 18 years old. A total of 8 types of gene emm (scarlet fever: 6 types, pharyngeal infection: 4 types) and 21 subtypes of gene emn (scarlet fever: 16 subtypes, pharyngeal infection: 10 subtypes) were identified. Three new subtypes were found in the study, naming emm1.63, emm12.62 and st5144.20. Among them, emm1.63 was found both in scarlet fever and pharyngeal infection patients, while emm12.62 and st5144. 20 were only found in pharyngeal infection patients. Among all the types of gene-emm, emm12 accounted for the highest percentage as 80.5% (491/610) and then followed by emm1 (18.0% (110/610)). Among all the subtypes, the dominant subtype was emm12.00, accounting for 69.0% (421/610), following by emm1.00 (16.9% (103/610)) and emm12.19 (6.1% (37/610)). All the above types and subtypes of gene emm were the most prevalent strains in scarlet fever patients and pharyngeal infection patients. Significant differences in the distribution of prevalent strains were observed among various aging patients and regions. The constituent ratios of emm1, emm1.00 and emm12.19 were higher in patients from suburb (emm1: 22.1% (47/213), emm1.00: 19.2% (40/213), emm12.19: 8.0% (17/213)) than those in urban areas (emm1: 15.9% (63/397), emm1.00: 15.6% (62/397), emm12.19: 5.0% (20/397)). The difference showed statistical significance (P < 0.05). The constituent ratio of emm1.00 was higher among patients aging 6-18 years old (19.2% (71/369)) than those aging 1 - 5 years old (13.3% (32/240)). The difference also showed statistical significance (χ(2) = 8.45, P < 0.05).
Conclusion:
Among the types of gene emm in GAS isolated from children in Beijing in year 2011, the most prevalent two were emm12 and emm1, and the most prevalent emm subtypes were emm12.00, emm1.00 and emm12.19. A significant difference in their distribution between various aging patients and isolated places can be obviously found.
Insights
Group A Streptococcus (GAS) emm gene typing in Beijing children revealed emm12 and emm1 as the most common types. Significant variations in emm type distribution were observed across different age groups and geographic locations.
Area of Science:
- Microbiology
- Genetics
- Epidemiology
Context:
- Group A Streptococcus (GAS) is a significant bacterial pathogen causing various infections in children.
- The M protein gene (emm) is a key virulence factor and a primary target for typing GAS strains.
- Understanding emm gene distribution is crucial for tracking GAS epidemiology and vaccine development.
Purpose:
- To investigate the distribution characteristics of M protein gene (emm) types in GAS isolates from children in Beijing during 2011.
- To compare the prevalence of different emm types and subtypes between scarlet fever and pharyngeal infection cases.
- To analyze the variations in emm gene distribution based on patient age and geographic location (urban vs. suburb).
Summary:
- A total of 610 GAS strains with identified emm genes were analyzed from 3315 pediatric patients with scarlet fever or pharyngeal infections.
- The most prevalent emm types were emm12 (80.5%) and emm1 (18.0%), with emm12.00, emm1.00, and emm12.19 being the dominant subtypes.
- Significant differences in emm type distribution were found between urban and suburban areas, as well as between different age groups (1-5 years vs. 6-18 years).
Impact:
- This study provides valuable data on the emm gene profiles of GAS circulating in Beijing, contributing to regional epidemiological surveillance.
- The identification of prevalent emm types and subtypes can inform the development of targeted GAS vaccines.
- The observed variations in distribution highlight the need for ongoing monitoring of GAS strains to understand transmission dynamics and potential shifts in virulence or resistance.
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