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Updated: May 14, 2026

A Faster, High Resolution, mtPA-GFP-based Mitochondrial Fusion Assay Acquiring Kinetic Data of Multiple Cells in Parallel Using Confocal Microscopy
Published on: July 20, 2012
Live-cell imaging of the association of STAT6-GFP with mitochondria
Rasel Khan1, Jason E Lee, Yang-Ming Yang
1Department of Cell Biology and Anatomy, New York Medical College, Valhalla, New York, United States of America.
Abstract:
The transcription factor STAT3 has been previously reported to be associated with mitochondria. However, we have been unable to visualize an association of STAT3-GFP, STAT3-DsRed or STAT3-Flag with mitochondria in human Hep3B hepatocytes thus far even though an association of these molecules with other cytoplasmic organelles (endosomes) was readily demonstrable. We then addressed the broader question of a possible association of other STAT-family of proteins with mitochondria by first using immunolocalization assays in Hep3B and human pulmonary arterial endothelial and smooth muscle cells. Strong anti-STAT6-immunolocalization with mitochondria was apparent in fluorescence and electron microscopy assays of cells first washed with a digitonin-sucrose buffer to remove bulk soluble STAT proteins. In live-cell imaging studies, STAT6-GFP, but not N1-GFP, was observed to constitutively colocalize with MitoTracker- and tetramethylrhodamine ethyl ester (TMRE)-positive mitochondria, and with mitochondrial F1-ATPase when assayed by immunofluorescence after fixation. This association was Tyr-phosphorylation independent in that a STAT6 truncated protein (STAT6(1-459)-GFP) which lacked the SH2 domain (517-632) and the cytokine-activated Y641 phosphorylation site also accumulated in MitoTracker-positive mitochondria. This was consistent with the unexpected discovery that anti-STAT6-immunofluoresence also associated with mitochondria in mouse embryo fibroblasts (MEFs) from both wild-type and the STAT6(SH2-/SH2-) mouse. MEFs from the latter mouse, which had been engineered in 1996 to be deleted in the STAT6 SH2 domain (amino acids 505-584) expressed an immune-specific ∼50 kDa protein detectable in whole cell and mitochondria-enriched fractions. Taken together, the present data provide the first definitive evidence of the association of any STAT-protein family member with mitochondria--that of STAT6.
Insights
This study reveals that Signal Transducer and Activator of Transcription 6 (STAT6) protein associates with mitochondria, unlike other STAT family members. This mitochondrial localization of STAT6 is independent of its phosphorylation status.
Area of Science:
- Cell Biology
- Molecular Biology
- Biochemistry
Background:
- The transcription factor STAT3 has been linked to mitochondria, but direct visualization of this association has been challenging.
- Previous studies have not confirmed STAT3's mitochondrial localization in human hepatocytes.
Purpose of the Study:
- To investigate the potential association of STAT family proteins with mitochondria.
- To determine if STAT6 specifically localizes to mitochondria.
Main Methods:
- Immunolocalization assays using fluorescence and electron microscopy in human cell lines (Hep3B, pulmonary arterial endothelial and smooth muscle cells).
- Live-cell imaging with STAT6-GFP and mitochondrial markers (MitoTracker, TMRE).
- Analysis of STAT6 association with mitochondria in mouse embryo fibroblasts (MEFs) from wild-type and STAT6 SH2 domain-deleted mice.
Main Results:
- Strong STAT6 immunolocalization with mitochondria was observed after removing soluble STAT proteins.
- STAT6-GFP constitutively colocalized with mitochondria in live-cell imaging.
- Mitochondrial association of STAT6 was independent of Tyr-phosphorylation, as a truncated STAT6 protein lacking the SH2 domain also localized to mitochondria.
- STAT6 was detected in mitochondria-enriched fractions of MEFs, including those lacking the SH2 domain.
Conclusions:
- STAT6 is the first identified member of the STAT protein family to definitively associate with mitochondria.
- The mitochondrial localization of STAT6 is independent of its SH2 domain and phosphorylation at Y641.
