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Updated: May 14, 2026

Microbiological Rapid On-Site Evaluation for Pulmonary Infectious Diseases
Published on: March 1, 2024
Key diagnostic features of granulomatous interstitial nephritis due to Encephalitozoon cuniculi in a lung transplant
Deborah J Levine1, Daniel J Riley, James H Jorgensen
1Department of Medicine, Division of Pulmonary Diseases, University of Texas Health Science Center at San Antonio, San Antonio, TX 78229, USA.
Abstract:
Microsporidia are increasingly recognized as opportunistic pathogens in immunocompromised organ transplant recipients (OTR). Disseminated infection due to Encephalitozoon sp. is reported mainly in human immunodeficiency virus (HIV)-positive patients and rarely in HIV-negative OTR. The clinical spectrum ranges from keratoconjunctivitis, to pneumonitis, to acute kidney injury. The kidney is a common site for disseminated infection; however, specialized techniques are required for definitive diagnosis. We report the first case of disseminated Encephalitozoon cuniculi infection in an HIV-negative lung transplant recipient diagnosed on renal biopsy. Five months after transplant, he presented with fever and a lung infiltrate and developed acute kidney injury. Renal biopsy showed granulomatous interstitial nephritis with gram-positive rod-shaped organisms with a "belt-like stripe" in tubular epithelial cells. Electron microscopy, polymerase chain reaction, and mammalian cell cultures of the urine sediment confirmed E. cuniculi infection. Retrospective review of a previous lung biopsy showed similar organisms. On the basis of electron microscopy findings, the patient was treated with albendazole, and immunosuppressive therapy was reduced. However, the patient expired due to Aspergillus pneumonia and disseminated E. cuniculi infection. Microsporidia should be considered in cases of fever of unknown origin and/or multiorgan infection in HIV-negative OTR when other causes have been excluded, as successful treatment requires early detection.
Insights
This study details the first case of disseminated Encephalitozoon cuniculi infection in an HIV-negative lung transplant recipient. Early detection is crucial for treating microsporidia, opportunistic pathogens in immunocompromised individuals.
Area of Science:
- Infectious Diseases
- Transplant Medicine
- Microbiology
Background:
- Microsporidia are opportunistic pathogens in immunocompromised organ transplant recipients (OTR).
- Disseminated Encephalitozoon species infections are rare in HIV-negative OTR, with varied clinical presentations.
- The kidney is a frequent site for disseminated microsporidial infections, often requiring specialized diagnostic methods.
Observation:
- A case of disseminated Encephalitozoon cuniculi infection in an HIV-negative lung transplant recipient is presented.
- The patient developed fever, lung infiltrate, and acute kidney injury five months post-transplant.
- Renal biopsy revealed granulomatous interstitial nephritis with characteristic organisms in tubular cells.
Findings:
- Electron microscopy, PCR, and urine culture confirmed E. cuniculi infection.
- Retrospective analysis of a lung biopsy also identified similar organisms.
- Despite treatment with albendazole and reduced immunosuppression, the patient succumbed to Aspergillus pneumonia and disseminated microsporidiosis.
Implications:
- Microsporidia should be considered in HIV-negative OTR presenting with fever of unknown origin or multiorgan infections.
- Early diagnosis of microsporidial infections is critical for effective treatment in transplant recipients.
- This case highlights the potential severity of disseminated Encephalitozoon cuniculi in immunocompromised hosts.
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