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Updated: May 14, 2026

Assessment of Selective mRNA Translation in Mammalian Cells by Polysome Profiling
Published on: October 28, 2014
Translational repression of thymidylate synthase by targeting its mRNA
Divita Garg1, Alexander V Beribisky, Glauco Ponterini
1Molecular and Cellular Modeling Group, Heidelberg Institute for Theoretical Studies (HITS), Schloss-Wolfsbrunnenweg 35, 69118 Heidelberg, Germany. Divita.Garg@tum.de
Abstract:
Resistance to drugs targeting human thymidylate synthase (TS) poses a major challenge in the field of anti-cancer therapeutics. Overexpression of the TS protein has been implicated as one of the factors leading to the development of resistance. Therefore, repressing translation by targeting the TS mRNA could help to overcome this problem. In this study, we report that the compound Hoechst 33258 (HT) can reduce cellular TS protein levels without altering TS mRNA levels, suggesting that it modulates TS expression at the translation level. We have combined nuclear magnetic resonance, UV-visible and fluorescence spectroscopy methods with docking and molecular dynamics simulations to study the interaction of HT with a region in the TS mRNA. The interaction predominantly involves intercalation of HT at a CC mismatch in the region near the translational initiation site. Our results support the use of HT-like compounds to guide the design of therapeutic agents targeting TS mRNA.
Insights
Hoechst 33258 (HT) reduces cancer drug resistance by lowering thymidylate synthase (TS) protein levels. This compound targets TS mRNA translation, offering a new strategy against anti-cancer drug resistance.
Area of Science:
- Biochemistry
- Molecular Biology
- Pharmacology
Background:
- Drug resistance targeting thymidylate synthase (TS) is a significant obstacle in cancer therapy.
- Overexpression of TS protein is a key factor contributing to this resistance.
- Targeting TS mRNA translation offers a potential strategy to overcome drug resistance.
Purpose of the Study:
- To investigate the effect of Hoechst 33258 (HT) on cellular TS protein levels.
- To explore the mechanism by which HT modulates TS expression.
- To elucidate the interaction between HT and TS mRNA.
Main Methods:
- Nuclear magnetic resonance (NMR) spectroscopy
- UV-visible and fluorescence spectroscopy
- Molecular docking and dynamics simulations
Main Results:
- HT significantly reduced cellular TS protein levels without affecting TS mRNA levels.
- HT was found to interact with a specific region of TS mRNA near the translational initiation site.
- The primary mode of interaction involved intercalation of HT at a CC mismatch within the TS mRNA.
Conclusions:
- HT modulates TS expression at the translational level.
- HT-like compounds show promise for developing novel therapeutic agents targeting TS mRNA.
- This study provides a foundation for designing new anti-cancer drugs to combat TS-mediated resistance.
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