Related Experiment Video
Updated: May 13, 2026

06:38
Pattern-based Search of Epigenomic Data Using GeNemo
Published on: October 8, 2017
Emerging insights into the ependymoma epigenome
Stephen C Mack1, Hendrik Witt, Xin Wang
1Developmental and Stem Cell Biology Program, The Hospital for Sick Children, Toronto, Ontario, Canada. stephen.mack@mail.utoronto.ca
Brain Pathology (Zurich, Switzerland)
|February 26, 2013
Summary
Ependymoma, a common pediatric brain tumor, has limited treatments. Epigenetic changes, specifically DNA methylation, are increasingly implicated in its development and may offer new therapeutic targets.
Area of Science:
- Neuro-oncology
- Epigenetics
- Pediatric oncology
Background:
- Ependymoma is the third most common pediatric brain tumor.
- Current therapeutic interventions are limited, with a 45% incurability rate.
- Genomic profiling reveals few driver genes and a balanced genomic profile.
Purpose of the Study:
- To review existing and emerging evidence on the role of the ependymoma epigenome in pathogenesis.
- To explore the potential of epigenetic modifiers as targeted therapeutic strategies for ependymoma.
Main Methods:
- Review of transcriptional and copy number profiling data.
- Analysis of candidate gene approaches focusing on hypermethylated promoters.
- Examination of genome-wide epigenetic array data.
Main Results:
- Evidence suggests DNA methylation is critical to ependymoma pathogenesis.
- The ependymoma epigenome is implicated as a key player in disease development.
- Epigenetic modifiers represent potential new therapeutic avenues.
Conclusions:
- The epigenome, particularly DNA methylation, plays a crucial role in ependymoma.
- Targeting epigenetic modifiers may provide novel therapeutic strategies for patients with ependymoma.
Related Concept Videos
Epigenetic Regulation
Epigenetic changes alter the physical structure of the DNA without changing the genetic sequence and often regulate whether genes are turned on or off. This regulation ensures that each cell produces only proteins necessary for its function. For example, proteins that promote bone growth are not produced in muscle cells. Epigenetic mechanisms play an essential role in healthy development. Conversely, precisely regulated epigenetic mechanisms are disrupted in diseases like cancer.
X-chromosome...
X-chromosome...
Epigenetic Regulation
Epigenetic mechanisms play an essential role in healthy development. Conversely, precisely regulated epigenetic mechanisms are disrupted in diseases like cancer.
Epigenetic Regulation
Epigenetic mechanisms play an essential role in healthy development. Conversely, precisely regulated epigenetic mechanisms are disrupted in diseases like cancer.

