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Related Concept Videos

Protein Folding01:25

Protein Folding

Proteins are chains of amino acids linked together by peptide bonds. Upon synthesis, a protein folds into a three-dimensional conformation, critical to its biological function. Interactions between its constituent amino acids guide protein folding, and hence the protein structure is primarily dependent on its amino acid sequence.
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...
Protein Folding01:22

Protein Folding

Overview
Protein Folding01:22

Protein Folding

Overview
Intrinsically Disordered Proteins02:18

Intrinsically Disordered Proteins

Intrinsically disordered proteins are a group of proteins that do not fold into specific three-dimensional structures. Their structural flexibility allows them to complement ordered proteins to perform functions that are inaccessible to rigid structures. They are more common in eukaryotes than prokaryotes and may either be exclusively intrinsically disordered or hybrid proteins, consisting of a mix of ordered and disordered regions. The absence of a rigid structure in these proteins can be...
Conservation of Protein Domains Over Different Proteins02:26

Conservation of Protein Domains Over Different Proteins

Protein domains are small structurally independent units that are part of a single amino acid chain.  Although these domains are often structurally independent, they may rely on synergistic effects to perform their functions as part of a larger protein. Protein domains may be conserved within the same organism, as well as across different organisms.
A limited set of protein domains often duplicate and recombine during evolution. These domains can be organized in different combinations to form...
Amyloid Fibrils03:03

Amyloid Fibrils

Amyloid fibrils are aggregates of misfolded proteins.  Under most circumstances, misfolded proteins are either refolded by chaperone proteins or degraded by the proteasome. However, in the case of a mutation or a disease, these proteins can accumulate to form large clusters and often further assemble to form elongated fibers, called fibrils. 
Amyloid deposits were observed as early as 1639 in the liver and the spleen.   In 1854, Rudolph Virchow performed iodine staining, normally used to...

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Related Experiment Video

Updated: May 13, 2026

Studying Protein Function and the Role of Altered Protein Expression by Antibody Interference and Three-dimensional Reconstructions
11:57

Studying Protein Function and the Role of Altered Protein Expression by Antibody Interference and Three-dimensional Reconstructions

Published on: April 21, 2016

A new interpretative paradigm for Conformational Protein Diseases.

Luigi Francesco Agnati1, Diego Guidolin, Amina S Woods

  • 1IRCCS San Camillo, Lido Venezia, Italy. luigiagnati@tin.it

Current Protein & Peptide Science
|February 28, 2013
PubMed
Summary

Conformational Protein Diseases (CPDs) involve protein misfolding and aggregation, leading to diverse disorders. This study explores their dual physiological and pathological roles, proposing evolutionary concepts like mis-exaptation.

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Mapping Dysfunctional Protein-Protein Interactions in Disease

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Area of Science:

  • Biochemistry
  • Molecular Biology
  • Neuroscience

Background:

  • Conformational Protein Diseases (CPDs) encompass over 40 disorders characterized by misfolded protein accumulation.
  • These proteins exhibit altered 3D structures, often rich in β-sheets, leading to aggregation and resistance to degradation.
  • Examples include Alzheimer's, Parkinson's, and prion diseases.

Purpose of the Study:

  • To explore the dual nature of potentially pathogenic proteins, which also possess uncharacterized physiological functions.
  • To investigate the evolutionary persistence of these proteins from yeast to humans.
  • To introduce novel concepts, mis-exaptation and mis-tinkering, to explain the pathological transformation of physiological protein actions.

Main Methods:

  • Conceptual analysis and theoretical framework development.
  • Literature review of existing research on CPDs and protein aggregation.
  • Application of evolutionary biology principles to protein misfolding.

Main Results:

  • Misfolded proteins can propagate their conformation to native proteins via a seeded crystallization-like process.
  • Potentially dangerous proteins have been conserved throughout evolution, suggesting underlying physiological roles.
  • The concepts of mis-exaptation and mis-tinkering offer a new paradigm for understanding CPDs.

Conclusions:

  • CPDs arise from proteins with inherent dual physiological and pathological potential.
  • Evolutionary concepts like mis-exaptation may explain why potentially harmful proteins persist.
  • A new interpretative framework for CPDs is proposed within the context of the Red Queen Theory of Aging.