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Updated: Sep 30, 2026

From Voxels to Knowledge: A Practical Guide to the Segmentation of Complex Electron Microscopy 3D-Data
Published on: August 13, 2014
A procedure for the extraction of object features in microscope images
1CNR Istituto CNUCE, Maria, Pisa, Italy.
Abstract:
A program for a detailed and fast feature extraction procedure on objects from a digitized microscope image is presented. The single-pass algorithm labels the pixels of the image that are above a selected threshold, and connects those which belong to the same object. A data structure addressable as an associative memory is created, thus avoiding the use of any recursive procedures. A detailed description of the procedure, which extracts features such as integrated optical density, area and baricenter coordinates, is presented.
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