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Updated: May 13, 2026

Three-dimensional Super Resolution Microscopy of F-actin Filaments by Interferometric PhotoActivated Localization Microscopy (iPALM)
Published on: December 1, 2016
Structure of the ParM filament at 8.5Å resolution
Pananghat Gayathri1, Takashi Fujii, Keiichi Namba
1MRC Laboratory of Molecular Biology, Hills Road, Cambridge CB2 0QH, UK.
Abstract:
The actin-like protein ParM forms the cytomotive filament of the ParMRC system, a type II plasmid segregation system encoded by Escherichia coli R1 plasmid. We report an 8.5Å resolution reconstruction of the ParM filament, obtained using cryo-electron microscopy. Fitting of the 3D density reconstruction with monomeric crystal structures of ParM provides insights into dynamic instability of ParM filaments. The structural analysis suggests that a ParM conformation, corresponding to a metastable state, is held within the filament by intrafilament contacts. This filament conformation of ParM can be attained only from the ATP-bound state, and induces a change in conformation of the bound nucleotide. The structural analysis also provides a rationale for the observed stimulation of hydrolysis upon polymerisation into the filament.
Insights
The ParMRC system
Area of Science:
- Microbiology and Molecular Biology
- Structural Biology
Background:
- The ParMRC system is a type II plasmid segregation system in Escherichia coli.
- The actin-like protein ParM forms the filament crucial for this system's function.
Purpose of the Study:
- To elucidate the structural basis of ParM filament dynamics.
- To understand the mechanism of ATP hydrolysis and nucleotide conformational changes within the filament.
Main Methods:
- Cryo-electron microscopy was used to obtain an 8.5Å resolution reconstruction of the ParM filament.
- Monomeric crystal structures of ParM were fitted into the 3D density reconstruction.
Main Results:
- A metastable ParM conformation, stabilized by intrafilament contacts, was identified within the filament.
- This filament conformation is dependent on the ATP-bound state and alters nucleotide conformation.
- Structural insights explain the stimulated hydrolysis of ATP upon ParM polymerization.
Conclusions:
- The study reveals the structural mechanisms underlying ParM filament dynamics and function in plasmid segregation.
- Understanding these dynamics provides a basis for further research into bacterial cytoskeletal elements and segregation systems.
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