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In Vitro Ubiquitination and Deubiquitination Assays of Nucleosomal Histones
Published on: July 25, 2019
Regulation of A20 and other OTU deubiquitinases by reversible oxidation
Yogesh Kulathu1, Francisco J Garcia, Tycho E T Mevissen
1Division of Protein and Nucleic Acid Chemistry, MRC Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge Biomedical Campus, Cambridge CB2 0QH, UK.
Abstract:
Protein ubiquitination is a highly versatile post-translational modification that regulates as diverse processes as protein degradation and kinase activation. Deubiquitinases hydrolyse ubiquitin modifications from proteins and are hence key regulators of the ubiquitin system. Ovarian tumour deubiquitinases comprise a family of fourteen human enzymes, many of which regulate cellular signalling pathways. Ovarian tumour deubiquitinases are cysteine proteases that cleave polyubiquitin chains in vitro and in cells, but little is currently known about their regulation. Here we show that ovarian tumour deubiquitinases are susceptible to reversible oxidation of the catalytic cysteine residue. High-resolution crystal structures of the catalytic domain of A20 in four different oxidation states reveal that the reversible form of A20 oxidation is a cysteine sulphenic acid intermediate, which is stabilised by the architecture of the catalytic centre. Using chemical tools to detect sulphenic acid intermediates, we show that many ovarian tumour deubiquitinases undergo reversible oxidation upon treatment with H2O2, revealing a new mechanism to regulate deubiquitinase activity.
Insights
Ovarian tumour deubiquitinases, key regulators of protein modification, are controlled by reversible cysteine oxidation. This oxidation, a cysteine sulphenic acid intermediate, offers a novel regulatory mechanism for deubiquitinase activity.
Area of Science:
- Biochemistry
- Molecular Biology
- Enzymology
Background:
- Protein ubiquitination is a critical post-translational modification regulating numerous cellular processes.
- Deubiquitinases (DUBs) are enzymes that remove ubiquitin modifications, acting as crucial regulators within the ubiquitin system.
- Ovarian tumour deubiquitinases (OTDs) are a family of cysteine proteases involved in cellular signaling, but their regulation remains poorly understood.
Purpose of the Study:
- To investigate the regulatory mechanisms governing ovarian tumour deubiquitinase activity.
- To elucidate the role of post-translational modifications in OTD function.
- To identify novel pathways controlling deubiquitinase activity.
Main Methods:
- High-resolution crystal structures of the catalytic domain of A20 in various oxidation states.
- Chemical assays to detect cysteine sulphenic acid intermediates.
- In vitro and cellular experiments using hydrogen peroxide (H2O2) treatment.
Main Results:
- Ovarian tumour deubiquitinases are susceptible to reversible oxidation at their catalytic cysteine residue.
- Crystal structures revealed a stabilized cysteine sulphenic acid intermediate in A20.
- Many OTDs undergo reversible oxidation upon H2O2 treatment, indicating a conserved regulatory mechanism.
Conclusions:
- Reversible oxidation of the catalytic cysteine is a novel mechanism for regulating ovarian tumour deubiquitinase activity.
- Cysteine sulphenic acid formation provides a dynamic control point for DUB function.
- This finding opens new avenues for understanding OTD regulation in cellular signaling pathways.
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