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Updated: May 13, 2026

A Lipid Extraction and Analysis Method for Characterizing Soil Microbes in Experiments with Many Samples
Published on: July 16, 2017
Loss in microbial diversity affects nitrogen cycling in soil
Laurent Philippot1, Aymé Spor, Catherine Hénault
1INRA, UMR 1347 Department of Agroecology, Dijon, France. laurent.philippot@dijon.inra.fr
Soil microbial diversity loss significantly reduces ecosystem functions like denitrification. This challenges the idea that functional redundancy in microbes is overstated, impacting crucial biogeochemical cycles.
Area of Science:
- Ecology
- Microbiology
- Soil Science
Background:
- Microbial communities are vital for Earth's biogeochemical cycles.
- The link between microbial diversity and ecosystem functioning remains debated.
- Denitrifiers play a key role in nitrogen cycling, a critical ecosystem service.
Purpose of the Study:
- To experimentally assess the functional consequences of soil microbial diversity loss.
- To investigate the relationship between denitrifier diversity metrics and ecosystem processes.
- To determine how resource availability influences the microbial diversity-functioning relationship.
Main Methods:
- Soil microbial communities were manipulated using a dilution approach.
- Denitrifier diversity (richness, evenness, phylogenetic diversity) was assessed via 454 sequencing.
- Potential denitrification activity was measured under varying resource levels (wheat residues).
Main Results:
- Dilution treatments significantly reduced denitrifier richness and diversity.
- A five-order-of-magnitude dilution decreased estimated richness by 75%.
- Reduced denitrifier diversity led to a 4-5 fold decrease in potential denitrification activity.
- Wheat residue addition amplified differences in denitrification between diversity levels.
Conclusions:
- Microbial diversity loss demonstrably alters terrestrial ecosystem processes.
- The importance of functional redundancy in soil microbial communities may be overstated.
- Resource availability modulates the impact of microbial diversity on ecosystem functioning.
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