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Updated: May 13, 2026

CD Spectroscopy to Study DNA-Protein Interactions
Published on: February 10, 2022
Overestimated accuracy of circular dichroism in determining protein secondary structure
Kailei Lin1, Huayan Yang, Zhengya Gao
1Department of Chemistry, Fudan University, Shanghai, 200433, China.
Abstract:
Circular dichroism (CD) is a spectroscopic technique widely used for estimating protein secondary structures in aqueous solution, but its accuracy has been doubted in recent work. In the present paper, the contents of nine globular proteins with known secondary structures were determined by CD spectroscopy and Fourier transform infrared spectroscopy (FTIR) in aqueous solution. A large deviation was found between the CD spectra and X-ray data, even when the experimental conditions were optimized. The content determined by FTIR was in good agreement with the X-ray crystallography data. Therefore, CD spectra are not recommended for directly calculating the content of a protein's secondary structure.
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