Human DEAD box helicase 3 couples IκB kinase ε to interferon regulatory factor 3 activation

Lili Gu1, Anthony Fullam, Ruth Brennan

  • 1National University of Ireland Maynooth, Maynooth, County Kildare, Ireland.

Insights

The DEAD box protein 3 (DDX3) acts as a scaffold, linking IκB kinase ε (IKKε) to interferon regulatory factor 3 (IRF3). This interaction is crucial for DDX3-mediated IRF3 phosphorylation and antiviral type I interferon (IFN) induction.

Area of Science:

  • Molecular biology
  • Virology
  • Immunology

Background:

  • The DEAD box protein 3 (DDX3) is a host factor essential for HIV and HCV replication and a potential drug target.
  • DDX3 interacts with IκB kinase ε (IKKε) and TANK-binding kinase 1 (TBK1), contributing to type I interferon (IFN) induction.
  • The precise molecular mechanism of DDX3 in IFN induction is not fully understood.

Purpose of the Study:

  • To elucidate the molecular mechanism by which DDX3 facilitates type I IFN induction.
  • To investigate the role of DDX3 in the phosphorylation of interferon regulatory factor 3 (IRF3) by IKKε.

Main Methods:

  • Co-immunoprecipitation assays to study protein interactions.
  • Site-directed mutagenesis to investigate the role of specific serine residues.
  • Reporter gene assays to assess promoter activation.

Main Results:

  • DDX3 directly interacts with and enhances the activation of IKKε.
  • Phosphorylation of DDX3 at serine 102 (S102) is essential for recruiting IRF3.
  • The DDX3-IRF3 interaction, mediated by S102 phosphorylation, is critical for IFN-β promoter activation.

Conclusions:

  • DDX3 functions as a scaffolding adaptor, directly facilitating IRF3 phosphorylation by IKKε.
  • DDX3 plays a key role in the pathway-specific activation of IRF3, contributing to innate antiviral responses.

Related Concept Videos

Regulation of the Unfolded Protein Response01:31

Regulation of the Unfolded Protein Response

Inositol-requiring kinase one or IRE1 is the most conserved eukaryotic unfolded protein response (UPR) receptor. It is a type I transmembrane protein kinase receptor with a distinctive site-specific RNase activity. As the binding mechanics of the misfolded proteins with the N-terminal domain of IRE-1 are unclear, three binding models — direct, indirect, and allosteric -- are proposed for receptor activation. Nevertheless, it is known that once a misfolded protein associates with IRE1, it...
NF-κB-dependent Signaling Pathway02:26

NF-κB-dependent Signaling Pathway

The transcription factor NF-κB was discovered in 1986 in the lab of Nobel laureate Professor David Baltimore, for its interaction with the immunoglobulin light chain enhancer in B-cells. After more than three decades of study, it is now evident that NF-κB regulates the expression of over 100 genes. Most of these genes play an essential role in the innate and adaptive immune responses as well as the inflammatory responses of animals.
NF-κB-dependent Signaling Mechanism
The heterodimer of NF-κB...
General Transcription Factors01:30

General Transcription Factors

Tissue-specific transcription factors contribute to diverse cellular functions in mammals. For example, the gene for beta globin, a major component of hemoglobin, is present in all cells of the body. However, it is only expressed in red blood cells because the transcription factors that can bind to the promoter sequences of the beta globin gene are only expressed in these cells. Tissue-specific transcription factors also ensure that mutations in these factors may impair only the function of...
The JAK-STAT Signaling Pathway01:20

The JAK-STAT Signaling Pathway

Several cytokine receptors have tightly bound Janus kinase or JAK proteins attached at their cytosolic tail. Small signaling molecules such as cytokines, growth hormones, or prolactins bind to the cytokine receptors and initiate their dimerization. The dimerization brings the cytosolic JAKs together that trans-phosphorylate and activates each other. The activated JAKs now phosphorylate cytosolic tails of the cytokine receptors, which serve as binding sites for adaptor proteins such as  SH2...
The Intrinsic Apoptotic Pathway01:31

The Intrinsic Apoptotic Pathway

Internal cellular stress, such as cellular injury or hypoxia, triggers intrinsic apoptosis. The B-cell lymphoma 2 (Bcl-2) family of proteins are the primary regulators of the intrinsic apoptotic pathway. For example, during DNA damage, checkpoint proteins, such as Ataxia Telangiectasia Mutated (ATM protein) and Checkpoints Factor-2 (Chk2) proteins, are activated. These proteins phosphorylate p53 which further activates pro-apoptotic proteins, such as Bax, Bak, PUMA, and Noxa, and inhibits...
PI3K/mTOR/AKT Signaling Pathway01:22

PI3K/mTOR/AKT Signaling Pathway

The mammalian target of rapamycin  (mTOR) is a serine/threonine kinase that regulates growth, proliferation, and cell survival in response to hormones, growth factors, or nutrient availability. This kinase exists in two structurally and functionally distinct forms: mTOR complex 1  (mTORC1) and mTOR complex 2  (mTORC2). The first form (mTORC1) is composed of a rapamycin-sensitive Raptor and proline-rich Akt substrate, PRAS40. In contrast,  mTORC2 consists of a rapamycin-insensitive companion...