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Related Concept Videos

Multiple Comparison Tests01:13

Multiple Comparison Tests

Multiple comparison test, abbreviated as MCT, is a post hoc analysis generally performed after comparing multiple samples with one or more tests. An MCT will help identify a significantly different sample among multiple samples or a factor among multiple factors.
It would be easy to compare two samples using a significance alpha level of 0.05. In other words, there is only one sample pair to be compared. However, it would be difficult to identify a significantly different sample if the number...

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Related Experiment Video

Updated: May 13, 2026

Large Scale Non-targeted Metabolomic Profiling of Serum by Ultra Performance Liquid Chromatography-Mass Spectrometry (UPLC-MS)
07:34

Large Scale Non-targeted Metabolomic Profiling of Serum by Ultra Performance Liquid Chromatography-Mass Spectrometry (UPLC-MS)

Published on: March 14, 2013

Cloud-based solution to identify statistically significant MS peaks differentiating sample categories.

Jun Ji1, Jeffrey Ling, Helen Jiang

  • 1Departments of Surgery, Stanford University, Stanford, CA 94305, USA.

BMC Research Notes
|March 26, 2013
PubMed
Summary
This summary is machine-generated.

This study introduces a cloud-based web application for analyzing mass spectrometry (MS) data, simplifying proteomics biomarker discovery. The tool efficiently processes large datasets, identifying statistically significant protein peaks for validation.

More Related Videos

A Strategy for Sensitive, Large Scale Quantitative Metabolomics
14:18

A Strategy for Sensitive, Large Scale Quantitative Metabolomics

Published on: May 27, 2014

Related Experiment Videos

Last Updated: May 13, 2026

Large Scale Non-targeted Metabolomic Profiling of Serum by Ultra Performance Liquid Chromatography-Mass Spectrometry (UPLC-MS)
07:34

Large Scale Non-targeted Metabolomic Profiling of Serum by Ultra Performance Liquid Chromatography-Mass Spectrometry (UPLC-MS)

Published on: March 14, 2013

A Strategy for Sensitive, Large Scale Quantitative Metabolomics
14:18

A Strategy for Sensitive, Large Scale Quantitative Metabolomics

Published on: May 27, 2014

Area of Science:

  • Proteomics
  • Biomarker Discovery
  • Bioinformatics

Background:

  • Mass spectrometry (MS) is a key tool for high-throughput proteomics biomarker discovery.
  • Challenges include managing large datasets, peak identification, and high-dimensional differential analysis with false discovery rate (FDR) control.
  • There is a need for "turnkey" solutions to rapidly process MS data for biomarker investigations.

Purpose of the Study:

  • To present an efficient and effective cloud-based solution for analyzing mass spectrometry data.
  • To provide experimental biologists with accessible "cloud" computing capabilities for MS data analysis.
  • To facilitate the discovery of potential protein biomarkers using MS.

Main Methods:

  • Development of a web application for online MS data uploading and analysis.
  • Implementation of cloud computing capabilities for large-scale data processing.
  • User-friendly interface designed for experimental biologists.

Main Results:

  • An efficient and effective solution for MS data analysis is presented.
  • The web portal offers easy access to cloud computing for experimental biologists.
  • The application supports large-scale MS data uploading and analysis.

Conclusions:

  • The presented web application simplifies large-scale MS data analysis.
  • This bioinformatic tool facilitates the discovery of potential protein biomarkers.
  • The user interface is designed for ease of use by biologists.