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Published on: December 27, 2024
Ataxia telangiectasia-mutated (ATM) kinase activity is regulated by ATP-driven conformational changes in the
Ji-Hoon Lee1, Michael R Mand, Rajashree A Deshpande
1Howard Hughes Medical Institute and the Department of Molecular Genetics and Microbiology, The University of Texas at Austin, Austin, Texas 78712, USA.
Abstract:
The Ataxia Telangiectasia-Mutated (ATM) protein kinase is recruited to sites of double-strand DNA breaks by the Mre11/Rad50/Nbs1 (MRN) complex, which also facilitates ATM monomerization and activation. MRN exists in at least two distinct conformational states, dependent on ATP binding and hydrolysis by the Rad50 protein. Here we use an ATP analog-sensitive form of ATM to determine that ATP binding, but not hydrolysis, by Rad50 is essential for MRN stimulation of ATM. Mre11 nuclease activity is dispensable, although some mutations in the Mre11 catalytic domain block ATM activation independent of nuclease function, as does the mirin compound. The coiled-coil domains of Rad50 are important for the DNA binding ability of MRN and are essential for ATM activation, but loss of the zinc hook connection can be substituted by higher levels of the complex. Nbs1 binds to the "closed" form of the MR complex, promoted by the zinc hook and by ATP binding. Thus the primary role of the hook is to tether Rad50 monomers together, promoting the association of the Rad50 catalytic domains into a form that binds ATP and also binds Nbs1. Collectively, these results show that the ATP-bound form of MRN is the critical conformation for ATM activation.
Insights
The Mre11/Rad50/Nbs1 (MRN) complex activates ATM kinase at DNA break sites. ATP binding by Rad50, not hydrolysis, is crucial for MRN to stimulate ATM, with the ATP-bound MRN form being key.
Area of Science:
- DNA damage response
- Protein kinase activation
- Molecular mechanisms of DNA repair
Background:
- The Ataxia Telangiectasia-Mutated (ATM) kinase is vital for DNA double-strand break repair.
- ATM is recruited and activated by the Mre11/Rad50/Nbs1 (MRN) complex.
- MRN complex conformational states are regulated by Rad50's ATP binding and hydrolysis.
Purpose of the Study:
- To elucidate the specific roles of Rad50's ATP binding and hydrolysis in MRN-mediated ATM activation.
- To investigate the contribution of Mre11 nuclease activity and Rad50 structural domains to ATM activation.
- To define the critical MRN complex conformation required for ATM activation.
Main Methods:
- Utilized an ATP analog-sensitive form of ATM to probe functional requirements.
- Assessed the impact of mutations in Mre11 and Rad50 domains on ATM activation.
- Investigated the role of mirin compound in inhibiting MRN-mediated ATM activation.
Main Results:
- Rad50's ATP binding, not hydrolysis, is essential for MRN to stimulate ATM.
- Mre11 nuclease activity is dispensable for ATM activation, though certain catalytic domain mutations impair it.
- Rad50 coiled-coil domains are crucial for MRN DNA binding and ATM activation; the zinc hook's role in tethering Rad50 monomers is critical for Nbs1 binding and ATP binding.
Conclusions:
- The ATP-bound conformation of the MRN complex is the essential form for stimulating ATM kinase activity.
- Rad50's ATP binding and structural integrity, particularly the zinc hook, are critical for MRN function in DNA repair signaling.
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