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Published on: May 19, 2023
Structural basis for inhibition of the fat mass and obesity associated protein (FTO)
WeiShen Aik1, Marina Demetriades, Muhammad K K Hamdan
1Chemistry Research Laboratory, University of Oxford , 12 Mansfield Road, Oxford OX1 3TA, United Kingdom.
Abstract:
The fat mass and obesity associated protein (FTO) is a potential target for anti-obesity medicines. FTO is a 2-oxoglutarate (2OG)-dependent N-methyl nucleic acid demethylase that acts on substrates including 3-methylthymidine, 3-methyluracil, and 6-methyladenine. To identify FTO inhibitors, we screened a set of 2OG analogues and related compounds using differential scanning fluorometry- and liquid chromatography-based assays. The results revealed sets of both cyclic and acyclic 2OG analogues that are FTO inhibitors. Identified inhibitors include small molecules that have been used in clinical studies for the inhibition of other 2OG oxygenases. Crystallographic analyses reveal inhibition by 2OG cosubstrate or primary substrate competitors as well as compounds that bind across both cosubstrate and primary substrate binding sites. The results will aid the development of more potent and selective FTO inhibitors.
Insights
Researchers identified novel inhibitors for the fat mass and obesity associated protein (FTO), a key target for anti-obesity drugs. These compounds, including 2-oxoglutarate (2OG) analogues, show promise for developing more effective obesity treatments.
Area of Science:
- Biochemistry
- Pharmacology
- Molecular Biology
Background:
- The fat mass and obesity associated protein (FTO) is a crucial N-methyl nucleic acid demethylase.
- FTO is recognized as a significant therapeutic target for developing anti-obesity medications.
Purpose of the Study:
- To identify novel inhibitors of the FTO enzyme.
- To explore 2-oxoglutarate (2OG) analogues and related compounds as potential FTO inhibitors.
Main Methods:
- Screening of 2OG analogues and related compounds using differential scanning fluorometry and liquid chromatography-based assays.
- Inhibitor characterization through crystallographic analyses to determine binding modes.
Main Results:
- Identification of both cyclic and acyclic 2OG analogues that inhibit FTO activity.
- Discovery of small molecules, some previously used in clinical studies for other 2OG oxygenases, that inhibit FTO.
- Crystallographic data revealed distinct binding mechanisms, including competition for cosubstrate/substrate sites and dual-site binding.
Conclusions:
- The identified 2OG analogues represent promising scaffolds for the development of FTO inhibitors.
- These findings provide a foundation for designing more potent and selective FTO inhibitors for anti-obesity drug discovery.
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