Functionally cloned pdrM from Streptococcus pneumoniae encodes a Na(+) coupled multidrug efflux pump
Kohei Hashimoto1, Wakano Ogawa, Toshihiro Nishioka
1Department of Molecular Microbiology, Graduate School of Medicine, Dentistry, and Pharmaceutical Sciences, Okayama University, Tsushima, Okayama, Japan.
Abstract:
Multidrug efflux pumps play an important role as a self-defense system in bacteria. Bacterial multidrug efflux pumps are classified into five families based on structure and coupling energy: resistance-nodulation-cell division (RND), small multidrug resistance (SMR), major facilitator (MF), ATP binding cassette (ABC), and multidrug and toxic compounds extrusion (MATE). We cloned a gene encoding a MATE-type multidrug efflux pump from Streptococcus pneumoniae R6, and designated it pdrM. PdrM showed sequence similarity with NorM from Vibrio parahaemolyticus, YdhE from Escherichia coli, and other bacterial MATE-type multidrug efflux pumps. Heterologous expression of PdrM let to elevated resistance to several antibacterial agents, norfloxacin, acriflavine, and 4',6-diamidino-2-phenylindole (DAPI) in E. coli KAM32 cells. PdrM effluxes acriflavine and DAPI in a Na(+)- or Li(+)-dependent manner. Moreover, Na(+) efflux via PdrM was observed when acriflavine was added to Na(+)-loaded cells expressing pdrM. Therefore, we conclude that PdrM is a Na(+)/drug antiporter in S. pneumoniae. In addition to pdrM, we found another two genes, spr1756 and spr1877,that met the criteria of MATE-type by searching the S. pneumoniae genome database. However, cloned spr1756 and spr1877 did not elevate the MIC of any of the investigated drugs. mRNA expression of spr1756, spr1877, and pdrM was detected in S. pneumoniae R6 under laboratory growth conditions. Therefore, spr1756 and spr1877 are supposed to play physiological roles in this growth condition, but they may be unrelated to drug resistance.
Insights
Streptococcus pneumoniae possesses a multidrug efflux pump, PdrM, which confers resistance to antibacterial agents by acting as a sodium-dependent drug antiporter. Other MATE-type genes in S. pneumoniae may have different physiological roles.
Area of Science:
- Microbiology
- Molecular Biology
- Biochemistry
Background:
- Multidrug efflux pumps are crucial bacterial self-defense mechanisms.
- These pumps are categorized into five families: RND, SMR, MF, ABC, and MATE.
- Understanding MATE-type pumps is vital for combating bacterial drug resistance.
Purpose of the Study:
- To clone and characterize a MATE-type multidrug efflux pump from Streptococcus pneumoniae R6.
- To investigate the substrate specificity and transport mechanism of the identified pump.
- To explore other potential MATE-type genes in S. pneumoniae.
Main Methods:
- Gene cloning and heterologous expression in E. coli KAM32.
- Determination of minimum inhibitory concentrations (MICs) for various antibacterial agents.
- Analysis of ion dependency (Na+, Li+) for substrate efflux.
- Detection of mRNA expression using laboratory growth conditions.
Main Results:
- Cloned MATE-type pump, designated PdrM, conferred resistance to norfloxacin, acriflavine, and DAPI.
- PdrM functions as a Na+/drug antiporter, exhibiting Na+- or Li+-dependent efflux of acriflavine and DAPI.
- Two additional MATE-type genes (spr1756, spr1877) were identified in S. pneumoniae but did not confer drug resistance.
- mRNA expression of pdrM, spr1756, and spr1877 was detected in S. pneumoniae R6.
Conclusions:
- PdrM is a novel Na+/drug antiporter in Streptococcus pneumoniae.
- While spr1756 and spr1877 are expressed, they likely serve physiological roles unrelated to the tested drug resistance.
- This study enhances the understanding of MATE-type efflux pumps and their diverse functions in bacteria.
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