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Peptide Scanning-assisted Identification of a Monoclonal Antibody-recognized Linear B-cell Epitope
Published on: March 24, 2017
Identification and characterization of a linearized B-cell epitope on the pr protein of dengue virus
Ke-Yu Song1,2, Hui Zhao2, Shi-Hua Li2
1Guangzhou No. 8 People's Hospital, Guangzhou Medical College, Guangzhou 510060, China.
Abstract:
The four serotypes of dengue virus (DENV) represent one of the major mosquito-borne pathogens globally; so far no vaccine or specific antiviral is available. During virion maturation, the pr protein is cleaved from its precursor form the prM protein on the surface of immature DENV by host protease. Recent findings have demonstrated that the pr protein not only played critical roles in virion assembly and maturation, but was also involved in antibody-dependent enhancement of DENV infection. However, the B-cell epitopes on the pr protein of DENV have not been well characterized. In this study, a set of 11 partially overlapping peptides spanning the entire pr protein of DENV-2 were fused with glutathione S-transferase and expressed in Escherichia coli. ELISA screening with murine hyperimmune antiserum against immature DENV identified the P8 peptide (⁵⁷KQNEPEDIDCWCNST⁷¹) in the pr protein as the major immunodominant epitope. Fine mapping by truncated protein assays confirmed the 8-e peptide ⁵⁷KQNEPEDI⁶⁴ was the smallest unit capable of antibody binding. Importantly, the 8-e epitope reacted with sera from dengue fever patients. Site-directed mutagenesis revealed the asparagine residue at position 59 was important for epitope recognition. The 8-e epitope coincided well with the B-cell epitopes predicted by Immune Epitope Database analysis, and 3D structural modelling mapped the 8-e peptide on the surface of prM-E heterodimers. Overall, our findings characterized a linearized B-cell epitope on the pr protein of DENV, which will help to understand the life cycle of DENV and pathogenesis of dengue infections in human.
Insights
Researchers identified a key B-cell epitope on the dengue virus (DENV) pr protein. This finding advances understanding of DENV infection and pathogenesis, crucial for developing future dengue fever treatments.
Area of Science:
- Virology
- Immunology
- Molecular Biology
Background:
- Dengue virus (DENV) is a major global mosquito-borne pathogen with no available vaccine or antiviral therapy.
- The DENV pr protein plays critical roles in viral maturation and antibody-dependent enhancement of infection.
- B-cell epitopes on the DENV pr protein are not well characterized, hindering therapeutic development.
Purpose of the Study:
- To characterize B-cell epitopes on the dengue virus (DENV) pr protein.
- To identify specific regions of the pr protein recognized by antibodies from dengue patients.
- To provide insights into DENV pathogenesis and potential therapeutic targets.
Main Methods:
- Expression of 11 overlapping peptides spanning the DENV-2 pr protein in Escherichia coli.
- ELISA screening using murine hyperimmune antiserum and sera from dengue fever patients.
- Fine mapping using truncated protein assays, site-directed mutagenesis, and 3D structural modeling.
Main Results:
- The P8 peptide (⁵⁷KQNEPEDIDCWCNST⁷¹) was identified as the major immunodominant epitope on the DENV pr protein.
- The 8-e peptide (⁵⁷KQNEPEDI⁶⁴) was confirmed as the smallest antibody-binding unit and reacted with patient sera.
- Asparagine at position 59 was crucial for epitope recognition; the epitope is surface-exposed on prM-E heterodimers.
Conclusions:
- A linearized B-cell epitope on the DENV pr protein has been characterized.
- This epitope is recognized by antibodies from dengue patients, indicating its relevance in human infection.
- The findings contribute to understanding DENV lifecycle, pathogenesis, and potential vaccine/therapeutic strategies.

