Related Experiment Video
Updated: May 12, 2026

Automated Two-dimensional Spatiotemporal Analysis of Mobile Single-molecule FRET Probes
Published on: November 23, 2021
Molecular binoculars: how to spatially resolve environmental fluctuations by following two or more single-molecule
Vassiliy Lubchenko1, Robert J Silbey
1Departments of Chemistry and Physics, University of Houston , Houston, Texas 77204-5003, United States.
Abstract:
We propose a novel type of spectral diffusion experiment that enables one to decouple spatial characteristics of the environmental fluctuations, such as their concentration, from the interaction with the chromophore. Traditional hole broadening experiments do not allow for such decoupling in the common case when the chromophore-environment interaction is scale invariant. Here we propose to simultaneously follow the spectral trails of a small number of nearby chromophores--two or more--which thereby sense a highly overlapping set of the fluctuations. To this end, we estimate the combined probability distribution for the frequencies of a set of chromophores contained within the same sample. The present setup introduces a new length scale, i.e., the interchromophore distance, which breaks the aforementioned scale invariance and enables one to determine independently the concentration of the environmental fluctuations and their coupling to the chromophores, by monitoring the time after which spectral diffusion of distinct chromophores becomes uncorrelated. We illustrate these results with structural excitations in low temperature glasses.
Related Concept Videos
Super-resolution Fluorescence Microscopy
UV–Vis Spectroscopy: Molecular Electronic Transitions
Molecular Spectroscopy: Absorption and Emission
IR Spectroscopy: Molecular Vibration Overview
Stretching vibrations are vibrational motions that occur along the bond line, changing the bond length or distance between two bonded atoms. They are further distinguished as symmetric or asymmetric. In symmetric stretching, the...

