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Describing a Transcription Factor Dependent Regulation of the MicroRNA Transcriptome
Published on: June 15, 2016
[The expression and regulatory mechanism of microRNA-708 in pediatric common B-cell acute lymphoblastic leukemia]
1Pediatrics, Cryomedicine Laboratory, Qilu Hospital of Shandong University, Jinan 250012, China.
Objective:
To evaluate the expression of microRNAs and reveal the regulatory mechanism of miRNA-708 in pediatric common acute lymphoblastic leukemia (ALL) (common-ALL).
Methods:
The expressions of microRNAs in common-ALL patients were detected by microarrays in 3 pediatric common-ALL samples, and then verified by stem-loop quantitative RT-PCR in 34 common-ALL samples. The target genes of miR-708 were found by bioinformatics software, and verified by dual-luciferases reporter assay, RT-PCR and Western blot.
Results:
Compared to normal bone marrow samples, of all the 2006 detected miRNAs, the expression of miR-708, miR-181b and miR-210 were 16.886 ± 16.854, 5.710 ± 4.652, and 9.789 ± 1.178, retrospectively, being significantly up-regulated expressed than those in normal control (1.872 ± 0.339, 1.276 ± 0.531 and 1.005 ± 0.080, retrospectively) (P < 0.05), while miR-27b and miR-345 were the two most down-regulated ones (0.524 ± 0.085 and 0.675 ± 0.086, retrospectively) (normal control: 1.123 ± 0.066 and 1.204 ± 0.140, retrospectively) (P < 0.05). And the expression of miR-708 and miR-181b were significantly correlated with the clinical types in common-ALL. In high risk common-ALL, miR-708 and miR-181b were much higher than in standard and middle risk common-ALL (P < 0.05). The further verification research in 293 cell line showed that miR-708 decreased the expression level of its target genes CNTFR, NNAT and GNG12 by combining with 3'-UTR of the 3 genes, moreover, miR-708 combined with CNTFR 3'-UTR in 394 ∼ 400 bp sequence region.
Conclusion:
MicroRNAs plays an important regulatory role during the occurrence and development of the pediatric common-ALL and miR-708 is an important factor for high risk common-ALL.
Insights
MicroRNAs are crucial in pediatric acute lymphoblastic leukemia (ALL) development. Specifically, miR-708 is significantly upregulated in high-risk common-ALL, indicating its role in disease progression.
Area of Science:
- Molecular Biology
- Genetics
- Oncology
Context:
- Pediatric common acute lymphoblastic leukemia (common-ALL) is a significant health concern.
- MicroRNAs (miRNAs) are increasingly recognized for their regulatory roles in various cancers.
- Understanding miRNA dysregulation in pediatric ALL is crucial for developing targeted therapies.
Purpose:
- To investigate the expression profiles of miRNAs in pediatric common-ALL.
- To elucidate the regulatory mechanism of miRNA-708 in the context of common-ALL.
- To identify potential diagnostic or prognostic biomarkers for high-risk common-ALL.
Summary:
- Microarray and RT-qPCR analyses revealed significant differential expression of miRNAs in common-ALL patients compared to normal controls.
- miR-708, miR-181b, and miR-210 were upregulated, while miR-27b and miR-345 were downregulated.
- miR-708 expression positively correlated with high-risk common-ALL and was shown to target CNTFR, NNAT, and GNG12 genes.
Impact:
- This study highlights the critical role of miRNAs in the pathogenesis of pediatric common-ALL.
- miR-708 emerges as a potential biomarker for identifying high-risk patients.
- Findings may pave the way for novel therapeutic strategies targeting miRNA pathways in pediatric leukemia.
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