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Related Concept Videos

Introduction to the Human Microbiota01:22

Introduction to the Human Microbiota

Microorganisms colonize various regions of the human body, including the mouth, nasal passages, throat, stomach, intestines, urogenital tract, and skin. The total number of microbial cells is estimated to range from 10¹³ to 10¹⁴—comparable to, or exceeding, the number of human somatic cells. This host–microbiome relationship has led to the conceptualization of humans as supraorganisms, wherein microbial communities perform vital roles in development, immunity, and disease...
Development of Human Microbiota01:30

Development of Human Microbiota

The human microbiota begins developing at birth and undergoes continual change as we age. Infancy marks a critical period of microbial sensitivity, offering a “window of opportunity” during which beneficial microbes help mature the immune system. By age three, children typically develop a more stable and diverse microbial community. Newborns acquire microbes from their immediate environment; vaginal delivery favors maternal vaginal microbes, while cesarean births favor microbes from the skin...
Human Virome01:26

Human Virome

The human body harbors a vast and diverse viral community known as the human virome. The virome includes bacteriophages that infect bacteria, and eukaryotic viruses that infect human cells. Transient dietary and environmental viruses also contribute to this dynamic ecosystem. Estimates suggest the human body may contain on the order of 10¹³ viral particles, though abundance varies widely by body site and detection method.Comprehensive characterization of the virome has become possible only with...
Microorganisms in Medicine and Therapeutics01:29

Microorganisms in Medicine and Therapeutics

Microorganisms play a fundamental role in vaccine development, gene therapy, and therapeutic production. Their biological properties are harnessed to advance medicine and public health. Beyond immunization, microorganisms contribute to gut health, antibiotic synthesis, and genetic disease treatment.Live Attenuated and Inactivated VaccinesLive attenuated vaccines, such as the measles, mumps, and rubella (MMR) vaccine, utilize weakened forms of pathogens to closely resemble natural infections.
The Oral Microbiota01:27

The Oral Microbiota

The oral microbiome includes a complex ecosystem comprising over 700 microbial species, identified through genomic sequencing and culture-based analyses to date. This community includes a core microbiome, found universally among individuals, and a variable component influenced by environmental factors such as diet, lifestyle, and host genetics. Site-specific conditions, including oxygen gradients, pH levels, and nutrient availability, determine the spatial distribution of these microorganisms...
Clinical Significance of Antibiotic Resistance01:25

Clinical Significance of Antibiotic Resistance

Methicillin-resistant Staphylococcus aureus (MRSA) presents a critical public health threat, arising from its capacity to resist β-lactam antibiotics due to acquisition of the mecA gene within the staphylococcal cassette chromosome mec (SCCmec). This gene encodes penicillin-binding protein 2a (PBP2a), which impairs binding efficacy of methicillin and other β-lactams. MRSA has evolved into distinct clonal lineages impacting humans and animals alike, reinforcing its significance within the One...

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Updated: May 12, 2026

Microbiota Analysis Using Two-step PCR and Next-generation 16S rRNA Gene Sequencing
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Microbiota Analysis Using Two-step PCR and Next-generation 16S rRNA Gene Sequencing

Published on: October 15, 2019

Investigators' perspectives on translating human microbiome research into clinical practice.

M J Slashinski1, S N Whitney, L S Achenbaum

  • 1Center for Medical Ethics and Health Policy, Department of Family and Community Medicine, Baylor College of Medicine, University of Texas School of Public Health, Houston, TX 77030, USA. melody.slashinski@bcm.edu

Public Health Genomics
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Human microbiome research offers a new medical paradigm. Investigators discussed its clinical utility, antibiotic impacts, and challenges in translating microbiome data into practice for improved health outcomes.

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Area of Science:

  • Microbiology
  • Genomics
  • Translational Medicine

Background:

  • Human microbiome research is poised to revolutionize medicine and public health.
  • This study explores ethical, legal, and social dimensions of microbiome research.
  • Focuses on translating research findings into clinical practice for health and disease management.

Purpose of the Study:

  • To document investigator perspectives on translating human microbiome research into clinical practice.
  • To identify key themes regarding the clinical utility and implications of microbiome research.
  • To explore challenges and strategies for integrating microbiome insights into healthcare.

Main Methods:

  • Conducted 60 in-depth, semi-structured interviews with researchers and NIH project leaders.
  • Explored ethical, legal, and social implications of human microbiome research.
  • Utilized thematic content analysis to identify emergent themes and patterns.

Main Results:

  • Identified three key themes from investigator interviews.
  • Theme 1: General perspectives on the clinical utility of human microbiome research.
  • Theme 2: Perspectives on antibiotic use, overuse, and misuse.
  • Theme 3: Concerns regarding future challenges in translating data to clinical practice.

Conclusions:

  • Investigator discussions highlight the critical importance of the clinical significance of human microbiome research.
  • Embracing a new paradigm of health and disease is crucial.
  • The role of microbial communities and clinical utility are central to future advancements.