Related Experiment Video
Updated: May 11, 2026

Applications of the Single-probe: Mass Spectrometry Imaging and Single Cell Analysis under Ambient Conditions
Published on: June 14, 2016
Mass spectrometry based imaging techniques for spatially resolved analysis of molecules
Andrea Matros1, Hans-Peter Mock
1Leibniz Institute of Plant Genetics and Crop Plant Research Gatersleben, Germany.
Mass spectrometry imaging (MSI) reveals spatial metabolite distribution in plants, overcoming limitations of traditional omics studies. This technique maps molecules within tissues, aiding the construction of spatially resolved biochemical networks.
Area of Science:
- Plant Biology
- Metabolomics
- Proteomics
- Analytical Chemistry
Background:
- Higher plants possess diverse tissues with specialized functions, reflected in distinct molecular profiles (transcripts, proteins, metabolites).
- Recent advancements in mass spectrometry have significantly improved metabolite and protein analysis.
- Traditional omics studies often analyze whole plant or organ extracts, losing crucial spatial information.
Purpose of the Study:
- To introduce and highlight the application of Mass Spectrometry Imaging (MSI) for analyzing spatial molecular distributions in plants.
- To demonstrate how MSI overcomes the limitations of traditional omics approaches by preserving spatial context.
- To showcase the potential of MSI in elucidating spatially resolved biochemical networks within plant systems.
Main Methods:
- Application of Mass Spectrometry Imaging (MSI) techniques, pioneered in medicine, to plant systems.
- Analysis of various plant organs and tissues using MSI.
- Profiling of metabolites from both primary and secondary metabolism within specific tissue locations.
Main Results:
- Successful spatial profiling of metabolites in diverse plant organs and tissues.
- Acquisition of distinct spatial patterns for various classes of metabolites.
- Demonstration of MSI's capability to provide location-specific molecular data.
Conclusions:
- Mass Spectrometry Imaging (MSI) is a powerful technique for understanding molecular distribution in plants.
- MSI enables the study of spatial variations in metabolites, crucial for understanding tissue-specific functions.
- The integration of MSI approaches is expected to significantly advance the construction of spatially resolved biochemical networks in plants.
Related Concept Videos
Mass Spectrometry: Complex Analysis
GC–MS is a powerful hyphenated method commonly used in forensics and environmental...
MALDI-TOF Mass Spectrometry
Tandem Mass Spectrometry
Mass Spectrometry: Overview
Mass Spectrometers
Matrix-Assisted Laser Desorption Ionization (MALDI)
