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Related Concept Videos

Issues And Trends In Healthcare Delivery System01:29

Issues And Trends In Healthcare Delivery System

The issues and trends in healthcare delivery are constantly changing. The COVID-19 pandemic is one recent issue that wreaked havoc on healthcare systems, causing a shortage of healthcare workers, high demand for medicines and supplies, and increased medical expenditure due to a lack of insurance. Other issues include rising healthcare costs and care fragmentation.
Cost Containment
Payment for healthcare services has historically promoted adoption of costly and often unnecessary or inefficient...
Extraction: Advanced Methods00:56

Extraction: Advanced Methods

Metal ions can be separated from one another by complexation with organic ligands–the chelating agent– to form uncharged chelates. Here, the chelating agent must contain hydrophobic groups and behave as a weak acid, losing a proton to bind with the metal. Since most organic ligands used in this process are insoluble or undergo oxidation in the aqueous phase, the chelating agent is initially added to the organic phase and extracted into the aqueous phase. The metal-ligand complex is formed in...
Upstream Processing01:27

Upstream Processing

Upstream processing represents a critical phase in biomanufacturing, wherein biological systems such as microorganisms, mammalian cells, or insect cells are cultivated to produce therapeutic proteins, vaccines, enzymes, or other biologically derived products. This phase encompasses all steps from the selection and genetic manipulation of the production organism to the cultivation of cells in bioreactors under tightly controlled environmental conditions.Host Selection and Genetic OptimizationThe...
Brick Cutting Techniques01:08

Brick Cutting Techniques

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Ribosome Profiling02:24

Ribosome Profiling

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Related Experiment Videos

Web scraping technologies in an API world.

Daniel Glez-Peña, Anália Lourenço, Hugo López-Fernández

    Briefings in Bioinformatics
    |May 2, 2013
    PubMed
    Summary
    This summary is machine-generated.

    Web data scraping remains a valuable technique for biomedical data integration when web services are insufficient. This review highlights scraping tools and demonstrates their ease of use for bioinformatics applications.

    Keywords:
    Web scrapingdata integrationdatabase interfacesinteroperability

    Related Experiment Videos

    Area of Science:

    • Bioinformatics
    • Computational Biology
    • Data Science

    Background:

    • Web services are standard for biomedical data integration.
    • Limitations exist where web services are unavailable or insufficient.
    • Web data scraping offers a complementary solution for data extraction.

    Purpose of the Study:

    • Review existing web scraping frameworks and tools.
    • Assess their strengths and limitations for data extraction.
    • Demonstrate the ease of implementing scraping pipelines for bioinformatics needs.

    Main Methods:

    • Systematic review of web scraping tools and frameworks.
    • Analysis of extraction capabilities and limitations.
    • Case study illustrating a biomedical data extraction scenario.
    • Description of bioinformatics meta-servers utilizing scraping.

    Main Results:

    • Web scraping provides a viable alternative for data integration when web services are lacking.
    • Current scraping tools offer diverse capabilities for content extraction.
    • Setting up data scraping pipelines can be achieved with minimal programming effort.
    • Examples like WhichGenes and PathJam showcase practical applications in bioinformatics.

    Conclusions:

    • Web data scraping is a crucial technique for addressing gaps in biomedical data integration.
    • The review provides insights into available tools and their applications.
    • Implementing scraping pipelines is accessible, enabling solutions for various bioinformatics challenges.